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Conference Paper
Genome-wide analysis of stepwise hepatocarcinogenesis using next generation sequencer, Midorikawa, Yutaka, Yamamoto Shogo, Ueda Hiroki, Sonoda Kotaro, Tsuji Shingo, Tatsuno Kenji, Shibata Tatsuhiro, Covington Kyle, Wheeler David A., Takayama Tadatoshi, et al. , HEPATOLOGY, Volume 58, p.396A–396A, (2013)
Journal Article
Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase., Sun, Tingting, Aceto Nicola, Meerbrey Kristen L., Kessler Jessica D., Zhou Chunshui, Migliaccio Ilenia, Nguyen Don X., Pavlova Natalya N., Botero Maria, Huang Jian, et al. , Cell, 2011 Mar 4, Volume 144, Issue 5, p.703-18, (2011) Abstract
Adverse outcomes in clear cell renal cell carcinoma with mutations of 3p21 epigenetic regulators BAP1 and SETD2: a report by MSKCC and the KIRC TCGA research network., Hakimi, Ari A., Ostrovnaya Irina, Reva Boris, Schultz Nikolaus, Chen Ying-Bei, Gonen Mithat, Liu Han, Takeda Shugaku, Voss Martin H., Tickoo Satish K., et al. , Clinical cancer research : an official journal of the American Association for Cancer Research, 2013 Jun 15, Volume 19, Issue 12, p.3259-67, (2013) Abstract
Amygdalar and hippocampal substrates of anxious temperament differ in their heritability., Oler, Jonathan A., Fox Andrew S., Shelton Steven E., Rogers Jeffrey, Dyer Thomas D., Davidson Richard J., Shelledy Wendy, Oakes Terrence R., Blangero John, and Kalin Ned H. , Nature, 2010 Aug 12, Volume 466, Issue 7308, p.864-8, (2010) Abstract
Analysis of prostate-specific antigen transcripts in chimpanzees, cynomolgus monkeys, baboons, and african green monkeys., Mubiru, James N., Yang Alice S., Olsen Christian, Nayak Sudhir, Livi Carolina B., Dick Edward J., Owston Michael, Garcia-Forey Magdalena, Shade Robert E., and Rogers Jeffrey , PloS one, 2014, Volume 9, Issue 4, p.e94522, (2014) Abstract
Analysis of transcriptome data in the red flour beetle, Tribolium castaneum., Park, Yoonseong, Aikins Jamie, Wang L. J., Beeman Richard W., Oppert Brenda, Lord Jeffrey C., Brown Susan J., Lorenzen Marcé D., Richards Stephen, Weinstock George M., et al. , Insect biochemistry and molecular biology, 2008 Apr, Volume 38, Issue 4, p.380-6, (2008) Abstract
Are extended biopsies really necessary to improve prostate cancer detection?, Damiano, R., Autorino R., Perdonà S., De Sio M., Oliva A., Esposito C., Cantiello F., Di Lorenzo G., Sacco R., and D'Armiento M. , Prostate cancer and prostatic diseases, 2003, Volume 6, Issue 3, p.250-5, (2003) Abstract
ARMC4 mutations cause primary ciliary dyskinesia with randomization of left/right body asymmetry., Hjeij, Rim, Lindstrand Anna, Francis Richard, Zariwala Maimoona A., Liu Xiaoqin, Li You, Damerla Rama, Dougherty Gerard W., Abouhamed Marouan, Olbrich Heike, et al. , American journal of human genetics, 2013 Aug 8, Volume 93, Issue 2, p.357-67, (2013) Abstract
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species., Bradnam, Keith R., Fass Joseph N., Alexandrov Anton, Baranay Paul, Bechner Michael, Birol Inanç, Boisvert Sébastien, Chapman Jarrod A., Chapuis Guillaume, Chikhi Rayan, et al. , GigaScience, 2013 Jul 22, Volume 2, Issue 1, p.10, (2013) Abstract
Association of exome sequences with plasma C-reactive protein levels in >9000 participants, Schick, U. M., Auer P. L., Bis J. C., Lin H., Wei P., Pankratz N., Lange L. A., Brody J., Stitziel N. O., Kim D. S., et al. , Human Molecular Genetics, (2014)
Association of genome-wide variation with highly sensitive cardiac troponin-T levels in European Americans and Blacks: a meta-analysis from atherosclerosis risk in communities and cardiovascular health studies., Yu, Bing, Barbalic Maja, Brautbar Ariel, Nambi Vijay, Hoogeveen Ron C., Tang Weihong, Mosley Thomas H., Rotter Jerome I., deFilippi Christopher R., O'Donnell Christopher J., et al. , Circulation. Cardiovascular genetics, 2013 Feb, Volume 6, Issue 1, p.82-8, (2013) Abstract
Association of low-frequency and rare coding-sequence variants with blood lipids and coronary heart disease in 56,000 whites and blacks., Peloso, Gina M., Auer Paul L., Bis Joshua C., Voorman Arend, Morrison Alanna C., Stitziel Nathan O., Brody Jennifer A., Khetarpal Sumeet A., Crosby Jacy R., Fornage Myriam, et al. , American journal of human genetics, 2014 Feb 6, Volume 94, Issue 2, p.223-32, (2014) Abstract
A BAC-based physical map of the major autosomes of Drosophila melanogaster., Hoskins, R. A., Nelson C. R., Berman B. P., Laverty T. R., George R. A., Ciesiolka L., Naeemuddin M., Arenson A. D., Durbin J., David R. G., et al. , Science (New York, N.Y.), 2000 Mar 24, Volume 287, Issue 5461, p.2271-4, (2000) Abstract
BCOR-CCNB3 fusions are frequent in undifferentiated sarcomas of male children., Peters, Tricia L., Kumar Vijetha, Polikepahad Sumanth, Lin Frank Y., Sarabia Stephen F., Liang Yu, Wang Wei-Lien, Lazar Alexander J., Doddapaneni Harshavardhan, Chao Hsu, et al. , Modern pathology : an official journal of the United States and Canadian Academy of Pathology, Inc, 2014 Oct 31, (2014) Abstract
Best practices and joint calling of the HumanExome BeadChip: the CHARGE Consortium., Grove, Megan L., Yu Bing, Cochran Barbara J., Haritunians Talin, Bis Joshua C., Taylor Kent D., Hansen Mark, Borecki Ingrid B., Cupples Adrienne L., Fornage Myriam, et al. , PloS one, 2013, Volume 8, Issue 7, p.e68095, (2013) Abstract
Building a comprehensive genomic program for hepatocellular carcinoma., Harring, Theresa R., Guiteau Jacfranz J., Nguyen Thao N. T., Cotton Ron T., Gingras Marie-Claude, Wheeler David A., O'Mahony Christine A., Gibbs Richard A., Brunicardi Charles F., and Goss John A. , World journal of surgery, 2011 Aug, Volume 35, Issue 8, p.1746-50, (2011) Abstract
The Cancer Genome Atlas Pan-Cancer analysis project., Chang, Kyle, Creighton Chad J., Davis Caleb F., Donehower Lawrence, Drummond Jennifer, Wheeler David, Ally Adrian, Balasundaram Miruna, Birol Inanc, Butterfield Yaron S. N., et al. , Nature genetics, 2013 Sep 26, Volume 45, Issue 10, p.1113-20, (2013)
The Cancer Genome Atlas Pan-Cancer analysis project., Weinstein, John N., Collisson Eric A., Mills Gordon B., Shaw Kenna Mills R., Ozenberger Brad A., Ellrott Kyle, Shmulevich Ilya, Sander Chris, and Stuart Joshua M. , Nature genetics, 2013 Oct, Volume 45, Issue 10, p.1113-20, (2013) Abstract
A catalog of reference genomes from the human microbiome., Nelson, Karen E., Weinstock George M., Highlander Sarah K., Worley Kim C., Creasy Heather Huot, Wortman Jennifer Russo, Rusch Douglas B., Mitreva Makedonka, Sodergren Erica, Chinwalla Asif T., et al. , Science (New York, N.Y.), 2010 May 21, Volume 328, Issue 5981, p.994-9, (2010) Abstract
Characterization of HPV and host genome interactions in primary head and neck cancers., Parfenov, Michael, Pedamallu Chandra Sekhar, Gehlenborg Nils, Freeman Samuel S., Danilova Ludmila, Bristow Christopher A., Lee Semin, Hadjipanayis Angela G., Ivanova Elena V., Wilkerson Matthew D., et al. , Proceedings of the National Academy of Sciences of the United States of America, 2014 Oct 13, (2014) Abstract
Characterizing the cancer genome in lung adenocarcinoma., Weir, Barbara A., Woo Michele S., Getz Gad, Perner Sven, Ding Li, Beroukhim Rameen, Lin William M., Province Michael A., Kraja Aldi, Johnson Laura A., et al. , Nature, 2007 Dec 6, Volume 450, Issue 7171, p.893-8, (2007) Abstract
Cohorts for Heart and Aging Research in Genomic Epidemiology (CHARGE) Consortium: Design of prospective meta-analyses of genome-wide association studies from 5 cohorts., Psaty, Bruce M., O'Donnell Christopher J., Gudnason Vilmundur, Lunetta Kathryn L., Folsom Aaron R., Rotter Jerome I., Uitterlinden André G., Harris Tamara B., Witteman Jacqueline C. M., and Boerwinkle Eric , Circulation. Cardiovascular genetics, 2009 Feb, Volume 2, Issue 1, p.73-80, (2009) Abstract
Combined sequence-based and genetic mapping analysis of complex traits in outbred rats., Baud, Amelie, Hermsen Roel, Guryev Victor, Stridh Pernilla, Graham Delyth, McBride Martin W., Foroud Tatiana, Calderari Sophie, Diez Margarita, Ockinger Johan, et al. , Nature genetics, 2013 Jul, Volume 45, Issue 7, p.767-75, (2013) Abstract
A common allele in RPGRIP1L is a modifier of retinal degeneration in ciliopathies., Khanna, Hemant, Davis Erica E., Murga-Zamalloa Carlos A., Estrada-Cuzcano Alejandro, Lopez Irma, den Hollander Anneke I., Zonneveld Marijke N., Othman Mohammad I., Waseem Naushin, Chakarova Christina F., et al. , Nature genetics, 2009 Jun, Volume 41, Issue 6, p.739-45, (2009) Abstract
Comparative and demographic analysis of orang-utan genomes., Locke, Devin P., Hillier Ladeana W., Warren Wesley C., Worley Kim C., Nazareth Lynne V., Muzny Donna M., Yang Shiaw-Pyng, Wang Zhengyuan, Chinwalla Asif T., Minx Pat, et al. , Nature, 2011 Jan 27, Volume 469, Issue 7331, p.529-33, (2011) Abstract

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