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Publications

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Book Chapter
Maintenance and replication during latency., Hu, J., Lieberman PM, and Renne R. , Maintenance and replication during latency., Cambridge, (2007) Abstract
Conference Paper
Determining Factors Important to Guiding Under Represented Minorities toward Research Careers., Murray, D., and Rivera H. , 50th Annual Meeting of the American Society for Cell Biology., Volume 20, (2010)
Developing Pathways for Underrepresented Minorities into Genomic Science., Murray, D., and Rivera H. , 176th Meeting of the American Association for the Advancement of Science., San Diego, CA., p.p128., (2010)
MTA2 is a metastasis promoter in breast cancer cells., Covington, K. R., Barone I., Cui Y., Tsimelzon A., Rodriguez A., Wang T., and Fuqua SA , Cancer Research, Volume 69, Number 2, p.170S–170S, (2009)
MTA2-Overexpression alters Rho pathway expression and enhances the metastatic behavior of breast cancer cells, Covington, Kyle R., Cui Yukun, Barone Ines, Rodriguez Arnoldo, Tsimelzon Anna, Wang Tao, and Fuqua Suzanne A. , CLINICAL & EXPERIMENTAL METASTASIS, Volume 26, Number 7, p.882–883, (2009)
Journal Article
A "double adaptor" method for improved shotgun library construction., Andersson, B., Wentland M. A., Ricafrente J. Y., Liu W., and Gibbs R. A. , Analytical biochemistry, 1996 Apr 5, Volume 236, Issue 1, p.107-13, (1996) Abstract
16S gut community of the Cameron County Hispanic Cohort., Ross, Matthew C., Muzny Donna M., McCormick Joseph B., Gibbs Richard A., Fisher-Hoch Susan P., and Petrosino Joseph F. , Microbiome, 2015, Volume 3, p.7, (2015) Abstract
28-way vertebrate alignment and conservation track in the UCSC Genome Browser., Miller, Webb, Rosenbloom Kate, Hardison Ross C., Hou Minmei, Taylor James, Raney Brian, Burhans Richard, King David C., Baertsch Robert, Blankenberg Daniel, et al. , Genome research, 2007 Dec, Volume 17, Issue 12, p.1797-808, (2007) Abstract
The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer., Pomerantz, Mark M., Ahmadiyeh Nasim, Jia Li, Herman Paula, Verzi Michael P., Doddapaneni Harshavardhan, Beckwith Christine A., Chan Jennifer A., Hills Adam, Davis Matt, et al. , Nature genetics, 2009 Aug, Volume 41, Issue 8, p.882-4, (2009) Abstract
Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase., Sun, Tingting, Aceto Nicola, Meerbrey Kristen L., Kessler Jessica D., Zhou Chunshui, Migliaccio Ilenia, Nguyen Don X., Pavlova Natalya N., Botero Maria, Huang Jian, et al. , Cell, 2011 Mar 4, Volume 144, Issue 5, p.703-18, (2011) Abstract
Adverse outcomes in clear cell renal cell carcinoma with mutations of 3p21 epigenetic regulators BAP1 and SETD2: a report by MSKCC and the KIRC TCGA research network., Hakimi, Ari A., Ostrovnaya Irina, Reva Boris, Schultz Nikolaus, Chen Ying-Bei, Gonen Mithat, Liu Han, Takeda Shugaku, Voss Martin H., Tickoo Satish K., et al. , Clinical cancer research : an official journal of the American Association for Cancer Research, 2013 Jun 15, Volume 19, Issue 12, p.3259-67, (2013) Abstract
Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas., Haecker, Irina, Gay Lauren A., Yang Yajie, Hu Jianhong, Morse Alison M., McIntyre Lauren M., and Renne Rolf , PLoS pathogens, 2012, Volume 8, Issue 8, p.e1002884, (2012) Abstract
Allelic Mutations of KITLG, Encoding KIT Ligand, Cause Asymmetric and Unilateral Hearing Loss and Waardenburg Syndrome Type 2., Zazo Seco, Celia, Serrão de Castro Luciana, van Nierop Josephine W., Morín Matías, Jhangiani Shalini, Verver Eva J. J., Schraders Margit, Maiwald Nadine, Wesdorp Mieke, Venselaar Hanka, et al. , American journal of human genetics, 2015 Nov 5, Volume 97, Issue 5, p.647-60, (2015) Abstract
Altered neuronal network and rescue in a human MECP2 duplication model., Nageshappa, S., Carromeu C., Trujillo C. A., Mesci P., Espuny-Camacho I., Pasciuto E., Vanderhaeghen P., Verfaillie C. M., Raitano S., Kumar A., et al. , Molecular psychiatry, 2015 Sep 8, (2015) Abstract
Amygdalar and hippocampal substrates of anxious temperament differ in their heritability., Oler, Jonathan A., Fox Andrew S., Shelton Steven E., Rogers Jeffrey, Dyer Thomas D., Davidson Richard J., Shelledy Wendy, Oakes Terrence R., Blangero John, and Kalin Ned H. , Nature, 2010 Aug 12, Volume 466, Issue 7308, p.864-8, (2010) Abstract
Analyses of deep mammalian sequence alignments and constraint predictions for 1% of the human genome., Margulies, Elliott H., Cooper Gregory M., Asimenos George, Thomas Daryl J., Dewey Colin N., Siepel Adam, Birney Ewan, Keefe Damian, Schwartz Ariel S., Hou Minmei, et al. , Genome research, 2007 Jun, Volume 17, Issue 6, p.760-74, (2007) Abstract
Analysis of microsatellite variation in Drosophila melanogaster with population-scale genome sequencing., Fondon, John W., Martin Andy, Richards Stephen, Gibbs Richard A., and Mittelman David , PloS one, 2012, Volume 7, Issue 3, p.e33036, (2012) Abstract
Analysis of prostate-specific antigen transcripts in chimpanzees, cynomolgus monkeys, baboons, and african green monkeys., Mubiru, James N., Yang Alice S., Olsen Christian, Nayak Sudhir, Livi Carolina B., Dick Edward J., Owston Michael, Garcia-Forey Magdalena, Shade Robert E., and Rogers Jeffrey , PloS one, 2014, Volume 9, Issue 4, p.e94522, (2014) Abstract
Analysis of rare, exonic variation amongst subjects with autism spectrum disorders and population controls., Liu, Li, Sabo Aniko, Neale Benjamin M., Nagaswamy Uma, Stevens Christine, Lim Elaine, Bodea Corneliu A., Muzny Donna, Reid Jeffrey G., Banks Eric, et al. , PLoS genetics, 2013 Apr, Volume 9, Issue 4, p.e1003443, (2013) Abstract
Analysis of transcriptome data in the red flour beetle, Tribolium castaneum., Park, Yoonseong, Aikins Jamie, Wang L. J., Beeman Richard W., Oppert Brenda, Lord Jeffrey C., Brown Susan J., Lorenzen Marcé D., Richards Stephen, Weinstock George M., et al. , Insect biochemistry and molecular biology, 2008 Apr, Volume 38, Issue 4, p.380-6, (2008) Abstract
Analysis of viral cis elements conferring Kaposi's sarcoma-associated herpesvirus episome partitioning and maintenance., Skalsky, Rebecca L., Hu Jianhong, and Renne Rolf , Journal of virology, 2007 Sep, Volume 81, Issue 18, p.9825-37, (2007) Abstract
Androgen receptor CAG repeat polymorphism in males of six non-human primate species., Mubiru, James N., Cavazos Nicole, Hemmat Peggah, Garcia-Forey Magdalena, Shade Robert E., and Rogers Jeffrey , Journal of medical primatology, 2012 Feb, Volume 41, Issue 1, p.67-70, (2012) Abstract
Androgen receptor promotes tamoxifen agonist activity by activation of EGFR in ERα-positive breast cancer., Ciupek, Andrew, Rechoum Yassine, Gu Guowei, Gelsomino Luca, Beyer Amanda R., Brusco Lauren, Covington Kyle R., Tsimelzon Anna, and Fuqua Suzanne A. W. , Breast cancer research and treatment, 2015 Oct 20, (2015) Abstract
ARMC4 mutations cause primary ciliary dyskinesia with randomization of left/right body asymmetry., Hjeij, Rim, Lindstrand Anna, Francis Richard, Zariwala Maimoona A., Liu Xiaoqin, Li You, Damerla Rama, Dougherty Gerard W., Abouhamed Marouan, Olbrich Heike, et al. , American journal of human genetics, 2013 Aug 8, Volume 93, Issue 2, p.357-67, (2013) Abstract
Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species., Bradnam, Keith R., Fass Joseph N., Alexandrov Anton, Baranay Paul, Bechner Michael, Birol Inanç, Boisvert Sébastien, Chapman Jarrod A., Chapuis Guillaume, Chikhi Rayan, et al. , GigaScience, 2013 Jul 22, Volume 2, Issue 1, p.10, (2013) Abstract


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