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Publications

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Journal Article
The genome sequence of taurine cattle: a window to ruminant biology and evolution., Elsik, Christine G., Tellam Ross L., Worley Kim C., Gibbs Richard A., Muzny Donna M., Weinstock George M., Adelson David L., Eichler Evan E., Elnitski Laura, Guigó Roderic, et al. , Science (New York, N.Y.), 2009 Apr 24, Volume 324, Issue 5926, p.522-8, (2009) Abstract
Genome sequence of the Brown Norway rat yields insights into mammalian evolution., Gibbs, Richard A., Weinstock George M., Metzker Michael L., Muzny Donna M., Sodergren Erica J., Scherer Steven, Scott Graham, Steffen David, Worley Kim C., Burch Paula E., et al. , Nature, 2004 Apr 1, Volume 428, Issue 6982, p.493-521, (2004) Abstract
Genome-wide association studies of cerebral white matter lesion burden: the CHARGE consortium., Fornage, Myriam, Debette Stephanie, Bis Joshua C., Schmidt Helena, Ikram Arfan M., Dufouil Carole, Sigurdsson Sigurdur, Lumley Thomas, DeStefano Anita L., Fazekas Franz, et al. , Annals of neurology, 2011 Jun, Volume 69, Issue 6, p.928-39, (2011) Abstract
Genome-Wide Association Study of a Heart Failure Related Metabolomic Profile Among African Americans in the Atherosclerosis Risk in Communities (ARIC) Study., Yu, Bing, Zheng Yan, Alexander Danny, Manolio Teri A., Alonso Alvaro, Nettleton Jennifer A., and Boerwinkle Eric , Genetic epidemiology, 2013 Aug 11, (2013) Abstract
Genome-wide detection and characterization of positive selection in human populations., Sabeti, Pardis C., Varilly Patrick, Fry Ben, Lohmueller Jason, Hostetter Elizabeth, Cotsapas Chris, Xie Xiaohui, Byrne Elizabeth H., McCarroll Steven A., Gaudet Rachelle, et al. , Nature, 2007 Oct 18, Volume 449, Issue 7164, p.913-8, (2007) Abstract
Genome-wide identification of direct targets of the Drosophila retinal determination protein Eyeless., Ostrin, Edwin J., Li Yumei, Hoffman Kristi, Liu Jing, Wang Keqing, Zhang Li, Mardon Graeme, and Chen Rui , Genome research, 2006 Apr, Volume 16, Issue 4, p.466-76, (2006) Abstract
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds., Gibbs, Richard A., Taylor Jeremy F., Van Tassell Curtis P., Barendse William, Eversole Kellye A., Gill Clare A., Green Ronnie D., Hamernik Debora L., Kappes Steven M., Lien Sigbjørn, et al. , Science (New York, N.Y.), 2009 Apr 24, Volume 324, Issue 5926, p.528-32, (2009) Abstract
The genomes of two key bumblebee species with primitive eusocial organization., Sadd, Ben M., Barribeau Seth M., Bloch Guy, de Graaf Dirk C., Dearden Peter, Elsik Christine G., Gadau Jürgen, Grimmelikhuijzen Cornelis J. P., Hasselmann Martin, Lozier Jeffrey D., et al. , Genome biology, 2015 Apr 24, Volume 16, Issue 1, p.76, (2015) Abstract
Genomic analysis of the nuclear receptor family: new insights into structure, regulation, and evolution from the rat genome., Zhang, Zhengdong, Burch Paula E., Cooney Austin J., Lanz Rainer B., Pereira Fred A., Wu Jiaqian, Gibbs Richard A., Weinstock George, and Wheeler David A. , Genome research, 2004 Apr, Volume 14, Issue 4, p.580-90, (2004) Abstract
Genomic profiling guides the choice of molecular targeted therapy of pancreatic cancer., Frank, Thomas S., Sun Xiaotian, Zhang Yuqing, Yang Jingxuan, Fisher William E., Gingras Marie-Claude, and Li Min , Cancer letters, 2015 Apr 15, (2015) Abstract
Genomic profiling of Sézary syndrome identifies alterations of key T cell signaling and differentiation genes., Wang, Linghua, Ni Xiao, Covington Kyle R., Yang Betty Y., Shiu Jessica, Zhang Xiang, Xi Liu, Meng Qingchang, Langridge Timothy, Drummond Jennifer, et al. , Nature genetics, 2015 Dec, Volume 47, Issue 12, p.1426-34, (2015) Abstract
Genomic scanning for expressed sequences in Xp21 identifies the glycerol kinase gene., Guo, W., Worley K., Adams V., Mason J., Sylvester-Jackson D., Zhang Y. H., Towbin J. A., Fogt D. D., Madu S., and Wheeler D. A. , Nature genetics, 1993 Aug, Volume 4, Issue 4, p.367-72, (1993) Abstract
Genomic sequencing of key genes in mouse pancreatic cancer cells., Wang, Y., Zhang Y., Yang J., Ni X., Liu S., Li Z., Hodges S. E., Fisher W. E., Brunicardi F. C., Gibbs R. A., et al. , Current molecular medicine, 2012 Mar, Volume 12, Issue 3, p.331-41, (2012) Abstract
Genotypic confirmation from the original dried blood specimens in a neonatal hemoglobinopathy screening program., Descartes, M., Huang Y., Zhang Y. H., McCabe L. L., Gibbs R., Therrell B. L., and McCabe E. R. , Pediatric research, 1992 Mar, Volume 31, Issue 3, p.217-21, (1992) Abstract
Gibbon genome and the fast karyotype evolution of small apes., Carbone, Lucia, Harris Alan R., Gnerre Sante, Veeramah Krishna R., Lorente-Galdos Belen, Huddleston John, Meyer Thomas J., Herrero Javier, Roos Christian, Aken Bronwen, et al. , Nature, 2014 Sep 11, Volume 513, Issue 7517, p.195-201, (2014) Abstract
The Glanville fritillary genome retains an ancient karyotype and reveals selective chromosomal fusions in Lepidoptera., Ahola, Virpi, Lehtonen Rainer, Somervuo Panu, Salmela Leena, Koskinen Patrik, Rastas Pasi, Välimäki Niko, Paulin Lars, Kvist Jouni, Wahlberg Niklas, et al. , Nature communications, 2014, Volume 5, p.4737, (2014) Abstract
Graded phenotypic response to partial and complete deficiency of a brain-specific transcript variant of the winged helix transcription factor RFX4., Blackshear, Perry J., Graves Joan P., Stumpo Deborah J., Cobos Inma, Rubenstein John L. R., and Zeldin Darryl C. , Development (Cambridge, England), 2003 Oct, Volume 130, Issue 19, p.4539-52, (2003) Abstract
Haplotype block linkage disequilibrium mapping., Xiong, Momiao, Zhao Jinying, and Boerwinkle Eric , Frontiers in bioscience : a journal and virtual library, 2003 May 1, Volume 8, p.a85-93, (2003) Abstract
High-quality genomic DNA extraction from formalin-fixed and paraffin-embedded samples deparaffinized using mineral oil., Lin, Jianghai, Kennedy Stephen H., Svarovsky Therese, Rogers Jeffrey, Kemnitz Joseph W., Xu Anlong, and Zondervan Krina T. , Analytical biochemistry, 2009 Dec 15, Volume 395, Issue 2, p.265-7, (2009) Abstract
A high-resolution map of human evolutionary constraint using 29 mammals., Lindblad-Toh, Kerstin, Garber Manuel, Zuk Or, Lin Michael F., Parker Brian J., Washietl Stefan, Kheradpour Pouya, Ernst Jason, Jordan Gregory, Mauceli Evan, et al. , Nature, 2011 Oct 27, Volume 478, Issue 7370, p.476-82, (2011) Abstract
A homozygous missense mutation in NEUROD1 is associated with non-syndromic autosomal recessive retinitis pigmentosa., Wang, Feng, Li Huajin, Xu Mingchu, Li Hui, Zhao Li, Yang Lizhu, Zaneveld Jacques E., Wang Keqing, Li Yumei, Sui Ruifang, et al. , Investigative ophthalmology & visual science, 2014 Dec 4, (2014) Abstract
Human Metabolome Associates With Dietary Intake Habits Among African Americans in the Atherosclerosis Risk in Communities Study., Zheng, Yan, Yu Bing, Alexander Danny, Steffen Lyn M., and Boerwinkle Eric , American journal of epidemiology, 2014 May 6, (2014) Abstract
The hypofunctional effect of P335L single nucleotide polymorphism on SSTR5 function., Zhou, Guisheng, Gingras Marie-Claude, Liu Shi-He, Li Donghui, Li Zhijun, Catania Robbi L., Stehling Kelly M., Li Min, Paganelli Giovanni, Gibbs Richard A., et al. , World journal of surgery, 2011 Aug, Volume 35, Issue 8, p.1715-24, (2011) Abstract
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project., Birney, Ewan, Stamatoyannopoulos John A., Dutta Anindya, Guigó Roderic, Gingeras Thomas R., Margulies Elliott H., Weng Zhiping, Snyder Michael, Dermitzakis Emmanouil T., Thurman Robert E., et al. , Nature, 2007 Jun 14, Volume 447, Issue 7146, p.799-816, (2007) Abstract
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project., Birney, Ewan, Stamatoyannopoulos John A., Dutta Anindya, Guigó Roderic, Gingeras Thomas R., Margulies Elliott H., Weng Zhiping, Snyder Michael, Dermitzakis Emmanouil T., Thurman Robert E., et al. , Nature, 2007 Jun 14, Volume 447, Issue 7146, p.799-816, (2007) Abstract


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