BEAUTY-X: enhanced BLAST searches for DNA queries.

TitleBEAUTY-X: enhanced BLAST searches for DNA queries.
Publication TypeJournal Article
Year of Publication1998
AuthorsWorley, KC, Culpepper, P, Wiese, BA, Smith, RF
JournalBioinformatics
Volume14
Issue10
Pagination890-1
Date Published1998
ISSN1367-4803
KeywordsAmino Acid Sequence, Computational Biology, Databases, Factual, DNA, Molecular Sequence Data, Proteins, Sequence Alignment, Software
Abstract

UNLABELLED: BEAUTY (BLAST Enhanced Alignment Utility) is an enhanced version of the BLAST database search tool that facilitates identification of the functions of matched sequences. Three recent improvements to the BEAUTY program described here make the enhanced output (1) available for DNA queries, (2) available for searches of any protein database, and (3) more up-to-date, with periodic updates of the domain information.AVAILABILITY: BEAUTY searches of the NCBI and EMBL non-redundant protein sequence databases are available from the BCM Search Launcher Web pages (http://gc.bcm.tmc. edu:8088/search-launcher/launcher.html). BEAUTY Post-Processing of submitted search results is available using the BCM Search Launcher Batch Client (version 2.6) (ftp://gc.bcm.tmc. edu/pub/software/search-launcher/).SUPPLEMENTARY INFORMATION: Example figures are available at http://dot.bcm.tmc. edu:9331/papers/beautypp.htmlCONTACT: (kworley,culpep)@bcm.tmc.edu
DOI10.1093/bioinformatics/14.10.890
Alternate JournalBioinformatics
PubMed ID9927720
Grant ListF32 HG000133 / HG / NHGRI NIH HHS / United States
1RO1-HG00973 / HG / NHGRI NIH HHS / United States
5 F32 HG00133 / HG / NHGRI NIH HHS / United States
P30-HG00210 / HG / NHGRI NIH HHS / United States

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