Best practices and joint calling of the HumanExome BeadChip: the CHARGE Consortium.

TitleBest practices and joint calling of the HumanExome BeadChip: the CHARGE Consortium.
Publication TypeJournal Article
Year of Publication2013
AuthorsGrove, ML, Yu, B, Cochran, BJ, Haritunians, T, Bis, JC, Taylor, KD, Hansen, M, Borecki, IB, L Cupples, A, Fornage, M, Gudnason, V, Harris, TB, Kathiresan, S, Kraaij, R, Launer, LJ, Levy, D, Liu, Y, Mosley, T, Peloso, GM, Psaty, BM, Rich, SS, Rivadeneira, F, Siscovick, DS, Smith, AV, Uitterlinden, A, van Duijn, CM, Wilson, JG, O'Donnell, CJ, Rotter, JI, Boerwinkle, E
JournalPLoS One
Volume8
Issue7
Paginatione68095
Date Published2013
ISSN1932-6203
KeywordsAging, Alleles, Cluster Analysis, Cohort Studies, Continental Population Groups, Exome, Female, Gene Frequency, Genomics, Genotype, Heart, Humans, Male, Oligonucleotide Array Sequence Analysis, Polymorphism, Single Nucleotide, Sample Size, Self Report, Sequence Analysis, DNA
Abstract

Genotyping arrays are a cost effective approach when typing previously-identified genetic polymorphisms in large numbers of samples. One limitation of genotyping arrays with rare variants (e.g., minor allele frequency [MAF]

DOI10.1371/journal.pone.0068095
Alternate JournalPLoS ONE
PubMed ID23874508
PubMed Central IDPMC3709915
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