Title | DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases. |
Publication Type | Journal Article |
Year of Publication | 2022 |
Authors | Wielscher, M, Mandaviya, PR, Kuehnel, B, Joehanes, R, Mustafa, R, Robinson, O, Zhang, Y, Bodinier, B, Walton, E, Mishra, PP, Schlosser, P, Wilson, R, Tsai, P-C, Palaniswamy, S, Marioni, RE, Fiorito, G, Cugliari, G, Karhunen, V, Ghanbari, M, Psaty, BM, Loh, M, Bis, JC, Lehne, B, Sotoodehnia, N, Deary, IJ, Chadeau-Hyam, M, Brody, JA, Cardona, A, Selvin, E, Smith, AK, Miller, AH, Torres, MA, Marouli, E, Gào, X, van Meurs, JBJ, Graf-Schindler, J, Rathmann, W, Koenig, W, Peters, A, Weninger, W, Farlik, M, Zhang, T, Chen, W, Xia, Y, Teumer, A, Nauck, M, Grabe, HJ, Doerr, M, Lehtimäki, T, Guan, W, Milani, L, Tanaka, T, Fisher, K, Waite, LL, Kasela, S, Vineis, P, Verweij, N, van der Harst, P, Iacoviello, L, Sacerdote, C, Panico, S, Krogh, V, Tumino, R, Tzala, E, Matullo, G, Hurme, MA, Raitakari, OT, Colicino, E, Baccarelli, AA, Kähönen, M, Herzig, K-H, Li, S, Conneely, KN, Kooner, JS, Köttgen, A, Heijmans, BT, Deloukas, P, Relton, C, Ong, KK, Bell, JT, Boerwinkle, E, Elliott, P, Brenner, H, Beekman, M, Levy, D, Waldenberger, M, Chambers, JC, Dehghan, A, Jarvelin, M-R |
Corporate Authors | BIOS Consortium |
Journal | Nat Commun |
Volume | 13 |
Issue | 1 |
Pagination | 2408 |
Date Published | 2022 May 03 |
ISSN | 2041-1723 |
Keywords | C-Reactive Protein, CpG Islands, DNA Methylation, Humans, Inflammation, Nucleotide Motifs |
Abstract | We performed a multi-ethnic Epigenome Wide Association study on 22,774 individuals to describe the DNA methylation signature of chronic low-grade inflammation as measured by C-Reactive protein (CRP). We find 1,511 independent differentially methylated loci associated with CRP. These CpG sites show correlation structures across chromosomes, and are primarily situated in euchromatin, depleted in CpG islands. These genomic loci are predominantly situated in transcription factor binding sites and genomic enhancer regions. Mendelian randomization analysis suggests altered CpG methylation is a consequence of increased blood CRP levels. Mediation analysis reveals obesity and smoking as important underlying driving factors for changed CpG methylation. Finally, we find that an activated CpG signature significantly increases the risk for cardiometabolic diseases and COPD. |
DOI | 10.1038/s41467-022-29792-6 |
Alternate Journal | Nat Commun |
PubMed ID | 35504910 |
PubMed Central ID | PMC9065016 |
Grant List | 75N92021D00006 / HL / NHLBI NIH HHS / United States N01HC85082 / HL / NHLBI NIH HHS / United States HHSN268200800007C / HL / NHLBI NIH HHS / United States BB/I025263/1 / BB_ / Biotechnology and Biological Sciences Research Council / United Kingdom MC_UU_00011/5 / MRC_ / Medical Research Council / United Kingdom MR/K026992/1 / MRC_ / Medical Research Council / United Kingdom G1001357 / MRC_ / Medical Research Council / United Kingdom N01HC85080 / HL / NHLBI NIH HHS / United States UL1 TR000124 / TR / NCATS NIH HHS / United States BB/S020845/1 / BB_ / Biotechnology and Biological Sciences Research Council / United Kingdom R01 HL086694 / HL / NHLBI NIH HHS / United States 16/136/68 / DH_ / Department of Health / United Kingdom R01 HL131136 / HL / NHLBI NIH HHS / United States MR/R023484/1 / MRC_ / Medical Research Council / United Kingdom R01 AG023629 / AG / NIA NIH HHS / United States HHSN268201800001C / HL / NHLBI NIH HHS / United States U01 HL080295 / HL / NHLBI NIH HHS / United States R01 HL120393 / HL / NHLBI NIH HHS / United States HHSN268201200036C / HL / NHLBI NIH HHS / United States RC2 HL102419 / HL / NHLBI NIH HHS / United States R01 NS087541 / NS / NINDS NIH HHS / United States WT081878MA / WT_ / Wellcome Trust / United Kingdom R01 HL103612 / HL / NHLBI NIH HHS / United States K08 HL116640 / HL / NHLBI NIH HHS / United States HHSN268201700001I / HL / NHLBI NIH HHS / United States MC_UU_00006/2 / MRC_ / Medical Research Council / United Kingdom WT202786/Z/16/Z / WT_ / Wellcome Trust / United Kingdom R01 HL092111 / HL / NHLBI NIH HHS / United States 217065/Z/19/Z / WT_ / Wellcome Trust / United Kingdom MR/S03532X/1 / MRC_ / Medical Research Council / United Kingdom HHSN268201700004I / HL / NHLBI NIH HHS / United States R01 HL105756 / HL / NHLBI NIH HHS / United States UL1 RR025005 / RR / NCRR NIH HHS / United States 212945/Z/18/Z / WT_ / Wellcome Trust / United Kingdom N01HC55222 / HL / NHLBI NIH HHS / United States R01 HL111089 / HL / NHLBI NIH HHS / United States BBI025751/1 / BB_ / Biotechnology and Biological Sciences Research Council / United Kingdom N01HC85079 / HL / NHLBI NIH HHS / United States R01 HL059367 / HL / NHLBI NIH HHS / United States MR/M01311/1 / MRC_ / Medical Research Council / United Kingdom N01HC85083 / HL / NHLBI NIH HHS / United States P30 ES030285 / ES / NIEHS NIH HHS / United States HHSN268201700002I / HL / NHLBI NIH HHS / United States U01 HG004402 / HG / NHGRI NIH HHS / United States N01HC85086 / HL / NHLBI NIH HHS / United States MR/S019669/1 / MRC_ / Medical Research Council / United Kingdom HHSN268201700005I / HL / NHLBI NIH HHS / United States RG/14/5/30893 / BHF_ / British Heart Foundation / United Kingdom HHSN268201700003I / HL / NHLBI NIH HHS / United States WT092830/Z/10/Z / WT_ / Wellcome Trust / United Kingdom R01 HL087641 / HL / NHLBI NIH HHS / United States RE/18/4/34215 / BHF_ / British Heart Foundation / United Kingdom U01 HL130114 / HL / NHLBI NIH HHS / United States R01 HL087652 / HL / NHLBI NIH HHS / United States G0601653 / MRC_ / Medical Research Council / United Kingdom R01 HL116747 / HL / NHLBI NIH HHS / United States MR/L01632X/1 / MRC_ / Medical Research Council / United Kingdom N01HC85081 / HL / NHLBI NIH HHS / United States BB/T019980/1 / BB_ / Biotechnology and Biological Sciences Research Council / United Kingdom |
DNA methylation signature of chronic low-grade inflammation and its role in cardio-respiratory diseases.
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