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Publications

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2000
The genome sequence of Drosophila melanogaster., Adams, M. D., Celniker S. E., Holt R. A., Evans C. A., Gocayne J. D., Amanatides P. G., Scherer S. E., Li P. W., Hoskins R. A., Galle R. F., et al. , Science (New York, N.Y.), 2000 Mar 24, Volume 287, Issue 5461, p.2185-95, (2000) Abstract
1999
Comparison of gene indexing databases., Bouck, J., Yu W., Gibbs R., and Worley K. , Trends in genetics : TIG, 1999 Apr, Volume 15, Issue 4, p.159-62, (1999)
1998
BEAUTY-X: enhanced BLAST searches for DNA queries., Worley, K. C., Culpepper P., Wiese B. A., and Smith R. F. , Bioinformatics (Oxford, England), 1998, Volume 14, Issue 10, p.890-1, (1998) Abstract
1997
Large-scale concatenation cDNA sequencing., Yu, W., Andersson B., Worley K. C., Muzny D. M., Ding Y., Liu W., Ricafrente J. Y., Wentland M. A., Lennon G., and Gibbs R. A. , Genome research, 1997 Apr, Volume 7, Issue 4, p.353-8, (1997) Abstract
1995
BEAUTY: an enhanced BLAST-based search tool that integrates multiple biological information resources into sequence similarity search results., Worley, K. C., Wiese B. A., and Smith R. F. , Genome research, 1995 Sep, Volume 5, Issue 2, p.173-84, (1995) Abstract
1996
A comparative transcription map of the murine bare patches (Bpa) and striated (Str) critical regions and human Xq28., Levin, M. L., Chatterjee A., Pragliola A., Worley K. C., Wehnert M., Zhuchenko O., Smith R. F., Lee C. C., and Herman G. E. , Genome research, 1996 Jun, Volume 6, Issue 6, p.465-77, (1996) Abstract
BCM Search Launcher--an integrated interface to molecular biology data base search and analysis services available on the World Wide Web., Smith, R. F., Wiese B. A., Wojzynski M. K., Davison D. B., and Worley K. C. , Genome research, 1996 May, Volume 6, Issue 5, p.454-62, (1996) Abstract
1995
Identification of new members of a carbohydrate kinase-encoding gene family., Worley, K. C., King K. Y., Chua S., McCabe E. R., and Smith R. F. , Journal of computational biology : a journal of computational molecular cell biology, 1995 Fall, Volume 2, Issue 3, p.451-8, (1995) Abstract
Rapid molecular cytogenetic analysis of X-chromosomal microdeletions: fluorescence in situ hybridization (FISH) for complex glycerol kinase deficiency., Worley, K. C., Lindsay E. A., Bailey W., Wise J., McCabe E. R., and Baldini A. , American journal of medical genetics, 1995 Jul 17, Volume 57, Issue 4, p.615-9, (1995) Abstract
1994
A dosage sensitive locus at chromosome Xp21 is involved in male to female sex reversal., Bardoni, B., Zanaria E., Guioli S., Floridia G., Worley K. C., Tonini G., Ferrante E., Chiumello G., McCabe E. R., and Fraccaro M. , Nature genetics, 1994 Aug, Volume 7, Issue 4, p.497-501, (1994) Abstract
1993
Genomic scanning for expressed sequences in Xp21 identifies the glycerol kinase gene., Guo, W., Worley K., Adams V., Mason J., Sylvester-Jackson D., Zhang Y. H., Towbin J. A., Fogt D. D., Madu S., and Wheeler D. A. , Nature genetics, 1993 Aug, Volume 4, Issue 4, p.367-72, (1993) Abstract
Yeast artificial chromosome cloning in the glycerol kinase and adrenal hypoplasia congenita region of Xp21., Worley, K. C., Ellison K. A., Zhang Y. H., Wang D. F., Mason J., Roth E. J., Adams V., Fogt D. D., Zhu X. M., and Towbin J. A. , Genomics, 1993 May, Volume 16, Issue 2, p.407-16, (1993) Abstract
1992
Identification of new markers in Xp21 between DXS28 (C7) and DMD., Worley, K. C., Towbin J. A., Zhu X. M., Barker D. F., Ballabio A., Chamberlain J., Biesecker L. G., Blethen S. L., Brosnan P., and Fox J. E. , Genomics, 1992 Aug, Volume 13, Issue 4, p.957-61, (1992) Abstract
Characterization of human genomic yeast artificial chromosome inserts containing hexokinase 1 coding information on chromosome 10., Gelb, B. D., Worley K. C., Griffin L. D., Adams V., Chinault A. C., and McCabe E. R. , Biochemical medicine and metabolic biology, 1992 Jun, Volume 47, Issue 3, p.265-9, (1992) Abstract
1991
Porin interaction with hexokinase and glycerol kinase: metabolic microcompartmentation at the outer mitochondrial membrane., Adams, V., Griffin L., Towbin J., Gelb B., Worley K., and McCabe E. R. , Biochemical medicine and metabolic biology, 1991 Jun, Volume 45, Issue 3, p.271-91, (1991) Abstract
2008
Novel microRNA candidates and miRNA-mRNA pairs in embryonic stem (ES) cells., Gu, Peili, Reid Jeffrey G., Gao Xiaolian, Shaw Chad A., Creighton Chad, Tran Peter L., Zhou Xiaochuan, Drabek Rafal B., Steffen David L., Hoang David M., et al. , PloS one, 2008, Volume 3, Issue 7, p.e2548, (2008) Abstract
The complete genome of an individual by massively parallel DNA sequencing., Wheeler, David A., Srinivasan Maithreyan, Egholm Michael, Shen Yufeng, Chen Lei, McGuire Amy, He Wen, Chen Yi-Ju, Makhijani Vinod, Roth Thomas G., et al. , Nature, 2008 Apr 17, Volume 452, Issue 7189, p.872-6, (2008) Abstract
2007
Characterizing the cancer genome in lung adenocarcinoma., Weir, Barbara A., Woo Michele S., Getz Gad, Perner Sven, Ding Li, Beroukhim Rameen, Lin William M., Province Michael A., Kraja Aldi, Johnson Laura A., et al. , Nature, 2007 Dec 6, Volume 450, Issue 7171, p.893-8, (2007) Abstract
Direct selection of human genomic loci by microarray hybridization., Albert, Thomas J., Molla Michael N., Muzny Donna M., Nazareth Lynne, Wheeler David, Song Xingzhi, Richmond Todd A., Middle Chris M., Rodesch Matthew J., Packard Charles J., et al. , Nature methods, 2007 Nov, Volume 4, Issue 11, p.903-5, (2007) Abstract
Demographic histories and patterns of linkage disequilibrium in Chinese and Indian rhesus macaques., Hernandez, Ryan D., Hubisz Melissa J., Wheeler David A., Smith David G., Ferguson Betsy, Rogers Jeffrey, Nazareth Lynne, Indap Amit, Bourquin Traci, McPherson John, et al. , Science (New York, N.Y.), 2007 Apr 13, Volume 316, Issue 5822, p.240-3, (2007) Abstract
2006
Targeting iCre expression to murine progesterone receptor cell-lineages using bacterial artificial chromosome transgenesis., Mukherjee, Atish, Soyal Selma M., Wheeler David A., Fernandez-Valdivia Rodrigo, Nguyen Jonathan, DeMayo Francesco J., and Lydon John P. , Genesis (New York, N.Y. : 2000), 2006 Dec, Volume 44, Issue 12, p.601-10, (2006) Abstract
Zebrafish dax1 is required for development of the interrenal organ, the adrenal cortex equivalent., Zhao, Y., Yang Z., Phelan J. K., Wheeler D. A., Lin S., and McCabe E. R. B. , Molecular endocrinology (Baltimore, Md.), 2006 Nov, Volume 20, Issue 11, p.2630-40, (2006) Abstract
2005
SNPdetector: a software tool for sensitive and accurate SNP detection., Zhang, Jinghui, Wheeler David A., Yakub Imtiaz, Wei Sharon, Sood Raman, Rowe William, Liu Paul P., Gibbs Richard A., and Buetow Kenneth H. , PLoS computational biology, 2005 Oct, Volume 1, Issue 5, p.e53, (2005) Abstract
Orphan nuclear receptor GCNF is required for the repression of pluripotency genes during retinoic acid-induced embryonic stem cell differentiation., Gu, Peili, LeMenuet Damien, Chung Arthur C. - K., Mancini Michael, Wheeler David A., and Cooney Austin J. , Molecular and cellular biology, 2005 Oct, Volume 25, Issue 19, p.8507-19, (2005) Abstract
Orphan nuclear receptor LRH-1 is required to maintain Oct4 expression at the epiblast stage of embryonic development., Gu, Peili, Goodwin Bryan, Chung Arthur C. - K., Xu Xueping, Wheeler David A., Price Roger R., Galardi Cristin, Peng Li, Latour Anne M., Koller Beverly H., et al. , Molecular and cellular biology, 2005 May, Volume 25, Issue 9, p.3492-505, (2005) Abstract


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