An Organismal CNV Mutator Phenotype Restricted to Early Human Development.

TitleAn Organismal CNV Mutator Phenotype Restricted to Early Human Development.
Publication TypeJournal Article
Year of Publication2017
AuthorsLiu, P, Yuan, B, Carvalho, CMB, Wuster, A, Walter, K, Zhang, L, Gambin, T, Chong, Z, Campbell, IM, Akdemir, ZCoban, Gelowani, V, Writzl, K, Bacino, CA, Lindsay, SJ, Withers, M, Gonzaga-Jauregui, C, Wiszniewska, J, Scull, J, Stankiewicz, P, Jhangiani, SN, Muzny, DM, Zhang, F, Chen, K, Gibbs, RA, Rautenstrauss, B, Cheung, SWai, Smith, J, Breman, A, Shaw, CA, Patel, A, Hurles, ME, Lupski, JR
JournalCell
Volume168
Issue5
Pagination830-842.e7
Date Published2017 Feb 23
ISSN1097-4172
Abstract

De novo copy number variants (dnCNVs) arising at multiple loci in a personal genome have usually been considered to reflect cancer somatic genomic instabilities. We describe a multiple dnCNV (MdnCNV) phenomenon in which individuals with genomic disorders carry five to ten constitutional dnCNVs. These CNVs originate from independent formation incidences, are predominantly tandem duplications or complex gains, exhibit breakpoint junction features reminiscent of replicative repair, and show increased de novo point mutations flanking the rearrangement junctions. The active CNV mutation shower appears to be restricted to a transient perizygotic period. We propose that a defect in the CNV formation process is responsible for the "CNV-mutator state," and this state is dampened after early embryogenesis. The constitutional MdnCNV phenomenon resembles chromosomal instability in various cancers. Investigations of this phenomenon may provide unique access to understanding genomic disorders, structural variant mutagenesis, human evolution, and cancer biology.

DOI10.1016/j.cell.2017.01.037
Alternate JournalCell
PubMed ID28235197
Grant ListR01 NS058529 / NS / NINDS NIH HHS / United States
U54 HG003273 / HG / NHGRI NIH HHS / United States
U54 HG006542 / HG / NHGRI NIH HHS / United States