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Publications

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2015
Convergent evolution of the genomes of marine mammals., Foote, Andrew D., Liu Yue, Thomas Gregg W. C., Vinař Tomáš, Alföldi Jessica, Deng Jixin, Dugan Shannon, van Elk Cornelis E., Hunter Margaret E., Joshi Vandita, et al. , Nature genetics, 2015 Mar, Volume 47, Issue 3, p.272-5, (2015) Abstract
Coronary heart disease and genetic variants with low phospholipase A2 activity., Polfus, Linda M., Gibbs Richard A., and Boerwinkle Eric , The New England journal of medicine, 2015 Jan 15, Volume 372, Issue 3, p.295-6, (2015)
COPA mutations impair ER-Golgi transport and cause hereditary autoimmune-mediated lung disease and arthritis., Watkin, Levi B., Jessen Birthe, Wiszniewski Wojciech, Vece Timothy J., Jan Max, Sha Youbao, Thamsen Maike, Santos-Cortez Regie L. P., Lee Kwanghyuk, Gambin Tomasz, et al. , Nature genetics, 2015 Apr 20, (2015) Abstract
Comparison and integration of deleteriousness prediction methods for nonsynonymous SNVs in whole exome sequencing studies., Dong, Chengliang, Wei Peng, Jian Xueqiu, Gibbs Richard, Boerwinkle Eric, Wang Kai, and Liu Xiaoming , Human molecular genetics, 2015 Apr 15, Volume 24, Issue 8, p.2125-37, (2015) Abstract
Clinical, morphological, biochemical, imaging and outcome parameters in 21 individuals with mitochondrial maintenance defect related to FBXL4 mutations., Huemer, Martina, Karall Daniela, Schossig Anna, Abdenur Jose E., Al Jasmi Fatma, Biagosch Caroline, Distelmaier Felix, Freisinger Peter, Graham Brett H., Haack Tobias B., et al. , Journal of inherited metabolic disease, 2015 Apr 14, (2015) Abstract
CRISPR-engineered mosaicism rapidly reveals that loss of Kcnj13 function in mice mimics human disease phenotypes., Zhong, Hua, Chen Yiyun, Li Yumei, Chen Rui, and Mardon Graeme , Scientific reports, 2015, Volume 5, p.8366, (2015) Abstract
2014
Characterization of HPV and host genome interactions in primary head and neck cancers., Parfenov, Michael, Pedamallu Chandra Sekhar, Gehlenborg Nils, Freeman Samuel S., Danilova Ludmila, Bristow Christopher A., Lee Semin, Hadjipanayis Angela G., Ivanova Elena V., Wilkerson Matthew D., et al. , Proceedings of the National Academy of Sciences of the United States of America, 2014 Oct 13, (2014) Abstract
Comparative primate genomics: emerging patterns of genome content and dynamics., Rogers, Jeffrey, and Gibbs Richard A. , Nature reviews. Genetics, 2014 May, Volume 15, Issue 5, p.347-59, (2014) Abstract
Comparative validation of the D. melanogaster modENCODE transcriptome annotation., Chen, Zhen-Xia, Sturgill David, Qu Jiaxin, Jiang Huaiyang, Park Soo, Boley Nathan, Suzuki Ana Maria, Fletcher Anthony R., Plachetzki David C., FitzGerald Peter C., et al. , Genome research, 2014 Jul, Volume 24, Issue 7, p.1209-23, (2014) Abstract
The common marmoset genome provides insight into primate biology and evolution., Worley, Kim , Nature genetics, 2014 Aug, Volume 46, Issue 8, p.850-7, (2014) Abstract
2013
The Cancer Genome Atlas Pan-Cancer analysis project., Chang, Kyle, Creighton Chad J., Davis Caleb F., Donehower Lawrence, Drummond Jennifer, Wheeler David, Ally Adrian, Balasundaram Miruna, Birol Inanc, Butterfield Yaron S. N., et al. , Nature genetics, 2013 Sep 26, Volume 45, Issue 10, p.1113-20, (2013)
The Cancer Genome Atlas Pan-Cancer analysis project., Weinstein, John N., Collisson Eric A., Mills Gordon B., Shaw Kenna Mills R., Ozenberger Brad A., Ellrott Kyle, Shmulevich Ilya, Sander Chris, and Stuart Joshua M. , Nature genetics, 2013 Oct, Volume 45, Issue 10, p.1113-20, (2013) Abstract
Comprehensive molecular diagnosis of 179 Leber congenital amaurosis and juvenile retinitis pigmentosa patients by targeted next generation sequencing., Wang, Xia, Wang Hui, Sun Vincent, Tuan Han-Fang, Keser Vafa, Wang Keqing, Ren Huanan, Lopez Irma, Zaneveld Jacques E., Siddiqui Sorath, et al. , Journal of medical genetics, 2013 Oct, Volume 50, Issue 10, p.674-88, (2013) Abstract
Complete Genome Sequence of Elephant Endotheliotropic Herpesvirus 1A., Ling, Paul D., Reid Jeffrey G., Qin Xiang, Muzny Donna M., Gibbs Richard, Petrosino Joseph, Peng Rongsheng, Zong Jian-Chao, Heaggans Sarah Y., and Hayward Gary S. , Genome announcements, 2013 Mar-Apr, Volume 1, Issue 2, p.e0010613, (2013) Abstract
Characterization of transcriptomes from sexual and asexual lineages of a New Zealand snail (Potamopyrgus antipodarum)., Wilton, Peter R., Sloan Daniel B., Logsdon John M., Doddapaneni Harshavardhan, and Neiman Maurine , Molecular ecology resources, 2013 Mar, Volume 13, Issue 2, p.289-94, (2013) Abstract
A comparative genomic analysis of the oxidative enzymes potentially involved in lignin degradation by Agaricus bisporus., Doddapaneni, Harshavardhan, Subramanian Venkataramanan, Fu Bolei, and Cullen Dan , Fungal genetics and biology : FG & B, 2013 Jun, Volume 55, p.22-31, (2013) Abstract
CRHR1 genotypes, neural circuits and the diathesis for anxiety and depression., Rogers, J., Raveendran M., Fawcett G. L., Fox A. S., Shelton S. E., Oler J. A., Cheverud J., Muzny D. M., Gibbs R. A., Davidson R. J., et al. , Molecular psychiatry, 2013 Jun, Volume 18, Issue 6, p.700-7, (2013) Abstract
CRHR1 genotypes, neural circuits and the diathesis for anxiety and depression., Rogers, J., Raveendran M., Fawcett G. L., Fox A. S., Shelton S. E., Oler J. A., Cheverud J., Muzny D. M., Gibbs R. A., Davidson R. J., et al. , Molecular psychiatry, 2013 Jun, Volume 18, Issue 6, p.700-7, (2013) Abstract
Comprehensive molecular characterization of clear cell renal cell carcinoma., Davis, Caleb F. , Nature, 2013 Jul 4, Volume 499, Issue 7456, p.43-9, (2013) Abstract
Combined sequence-based and genetic mapping analysis of complex traits in outbred rats., Baud, Amelie, Hermsen Roel, Guryev Victor, Stridh Pernilla, Graham Delyth, McBride Martin W., Foroud Tatiana, Calderari Sophie, Diez Margarita, Ockinger Johan, et al. , Nature genetics, 2013 Jul, Volume 45, Issue 7, p.767-75, (2013) Abstract
Characterizing polymorphisms and allelic diversity of von Willebrand factor gene in the 1000 Genomes., Wang, Q. Y., Song J., Gibbs R. A., Boerwinkle E., Dong J. F., and Yu F. L. , Journal of thrombosis and haemostasis : JTH, 2013 Feb, Volume 11, Issue 2, p.261-9, (2013) Abstract


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