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Publications

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2009
GOSR2 Lys67Arg is associated with hypertension in whites., Meyer, Tamra E., Shiffman Dov, Morrison Alanna C., Rowland Charles M., Louie Judy Z., Bare Lance A., Ross David A., Arellano Andre R., Chasman Daniel I., Ridker Paul M., et al. , American journal of hypertension, 2009 Feb, Volume 22, Issue 2, p.163-8, (2009) Abstract
Glucocorticoid receptor gene variant in the 3' untranslated region is associated with multiple measures of blood pressure., Chung, Charles C., Shimmin Lawrence, Natarajan Sivamani, Hanis Craig L., Boerwinkle Eric, and Hixson James E. , The Journal of clinical endocrinology and metabolism, 2009 Jan, Volume 94, Issue 1, p.268-76, (2009) Abstract
2012
PDX-1 is a therapeutic target for pancreatic cancer, insulinoma and islet neoplasia using a novel RNA interference platform., Liu, Shi-He, Rao Donald D., Nemunaitis John, Senzer Neil, Zhou Guisheng, Dawson David, Gingras Marie-Claude, Wang Zhaohui, Gibbs Richard, Norman Michael, et al. , PloS one, 2012, Volume 7, Issue 8, p.e40452, (2012) Abstract
2009
Basic principles and technologies for deciphering the genetic map of cancer., Voidonikolas, Georgios, Kreml Stephanie S., Chen Changyi, Fisher William E., Brunicardi Charles F., Gibbs Richard A., and Gingras Marie-Claude , World journal of surgery, 2009 Apr, Volume 33, Issue 4, p.615-29, (2009) Abstract
Sequencing the full-length of the phosphatase and tensin homolog (PTEN) gene in hepatocellular carcinoma (HCC) using the 454 GS20 and Illumina GA DNA sequencing platforms., Rodriguez, Joel A., Guiteau Jacfranz J., Nazareth Lynne, Reid Jeff G., Goss John A., Gibbs Richard A., and Gingras Marie-Claude , World journal of surgery, 2009 Apr, Volume 33, Issue 4, p.647-52, (2009) Abstract
2006
High-throughput gene expression profiling--a work-in-progress with great potential for proteomics., Roussel, Eugene, and Gingras Marie-Claude , Current opinion in drug discovery & development, 2006 May, Volume 9, Issue 3, p.332-8, (2006) Abstract
2010
PERSONALIZED GENOMICS IN THE 21ST CENTURY: IMPLICATIONS FOR NURSING RESEARCH WITH CHILDREN AND FAMILIES, SYPK, Shiao, and Gingras M. C. , Southern Online Journal of Nursing Research, 09/2010, Volume 10, Issue 3, (2010) Abstract
2012
TWIST represses estrogen receptor-alpha expression by recruiting the NuRD protein complex in breast cancer cells., Fu, Junjiang, Zhang Lianmei, He Tao, Xiao Xiuli, Liu Xiaoyan, Wang Li, Yang Luquan, Yang Manman, Zhang Tiandan, Chen Rui, et al. , International journal of biological sciences, 2012, Volume 8, Issue 4, p.522-32, (2012) Abstract
REGγ is associated with multiple oncogenic pathways in human cancers., He, Jing, Cui Long, Zeng Yu, Wang Guangqiang, Zhou Ping, Yang Yuanyuan, Ji Lei, Zhao Yanyan, Chen Jiwu, Wang Zhuo, et al. , BMC cancer, 2012, Volume 12, p.75, (2012) Abstract
Exome capture reveals ZNF423 and CEP164 mutations, linking renal ciliopathies to DNA damage response signaling., Chaki, Moumita, Airik Rannar, Ghosh Amiya K., Giles Rachel H., Chen Rui, Slaats Gisela G., Wang Hui, Hurd Toby W., Zhou Weibin, Cluckey Andrew, et al. , Cell, 2012 Aug 3, Volume 150, Issue 3, p.533-48, (2012) Abstract
Direct regulation of GTP homeostasis by (p)ppGpp: a critical component of viability and stress resistance., Kriel, Allison, Bittner Alycia N., Kim Sok Ho, Liu Kuanqing, Tehranchi Ashley K., Zou Winnie Y., Rendon Samantha, Chen Rui, Tu Benjamin P., and Wang Jue D. , Molecular cell, 2012 Oct 26, Volume 48, Issue 2, p.231-41, (2012) Abstract
MAPK target sites of eyes absent are not required for eye development or survival in Drosophila., Jusiak, Barbara, Abulimiti Abuduaini, Haelterman Nele, Chen Rui, and Mardon Graeme , PloS one, 2012, Volume 7, Issue 12, p.e50776, (2012) Abstract
2013
A functional variomics tool for discovering drug-resistance genes and drug targets., Huang, Zhiwei, Chen Kaifu, Zhang Jianhuai, Li Yongxiang, Wang Hui, Cui Dandan, Tang Jiangwu, Liu Yong, Shi Xiaomin, Li Wei, et al. , Cell reports, 2013 Feb 21, Volume 3, Issue 2, p.577-85, (2013) Abstract
Union makes strength: a worldwide collaborative genetic and clinical study to provide a comprehensive survey of RD3 mutations and delineate the associated phenotype., Perrault, Isabelle, Estrada-Cuzcano Alejandro, Lopez Irma, Kohl Susanne, Li Shiqiang, Testa Francesco, Zekveld-Vroon Renate, Wang Xia, Pomares Esther, Andorf Jean, et al. , PloS one, 2013, Volume 8, Issue 1, p.e51622, (2013) Abstract
Next-generation sequencing-based molecular diagnosis of a Chinese patient cohort with autosomal recessive retinitis pigmentosa., Fu, Qing, Wang Feng, Wang Hui, Xu Fei, Zaneveld Jacques E., Ren Huanan, Keser Vafa, Lopez Irma, Tuan Han-Fang, Salvo Jason S., et al. , Investigative ophthalmology & visual science, 2013 Jun, Volume 54, Issue 6, p.4158-66, (2013) Abstract
Bacterial discrimination by dictyostelid amoebae reveals the complexity of ancient interspecies interactions., Nasser, Waleed, Santhanam Balaji, Miranda Edward Roshan, Parikh Anup, Juneja Kavina, Rot Gregor, Dinh Chris, Chen Rui, Zupan Blaz, Shaulsky Gad, et al. , Current biology : CB, 2013 May 20, Volume 23, Issue 10, p.862-72, (2013) Abstract
A comparative genomic analysis of the oxidative enzymes potentially involved in lignin degradation by Agaricus bisporus., Doddapaneni, Harshavardhan, Subramanian Venkataramanan, Fu Bolei, and Cullen Dan , Fungal genetics and biology : FG & B, 2013 Jun, Volume 55, p.22-31, (2013) Abstract
Characterization of transcriptomes from sexual and asexual lineages of a New Zealand snail (Potamopyrgus antipodarum)., Wilton, Peter R., Sloan Daniel B., Logsdon John M., Doddapaneni Harshavardhan, and Neiman Maurine , Molecular ecology resources, 2013 Mar, Volume 13, Issue 2, p.289-94, (2013) Abstract
Identification of a response regulator involved in surface attachment, cell-cell aggregation, exopolysaccharide production and virulence in the plant pathogen Xylella fastidiosa., Voegel, Tanja M., Doddapaneni Harshavardhan, Cheng Davis W., Lin Hong, Stenger Drake C., Kirkpatrick Bruce C., and Roper Caroline M. , Molecular plant pathology, 2013 Apr, Volume 14, Issue 3, p.256-64, (2013) Abstract
OikoBase: a genomics and developmental transcriptomics resource for the urochordate Oikopleura dioica., Danks, Gemma, Campsteijn Coen, Parida Mrutyunjaya, Butcher Stephen, Doddapaneni Harsha, Fu Bolei, Petrin Raul, Metpally Raghu, Lenhard Boris, Wincker Patrick, et al. , Nucleic acids research, 2013 Jan, Volume 41, Issue Database issue, p.D845-53, (2013) Abstract
2012
Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche., Morin, Emmanuelle, Kohler Annegret, Baker Adam R., Foulongne-Oriol Marie, Lombard Vincent, Nagy Laszlo G., Ohm Robin A., Patyshakuliyeva Aleksandrina, Brun Annick, Aerts Andrea L., et al. , Proceedings of the National Academy of Sciences of the United States of America, 2012 Oct 23, Volume 109, Issue 43, p.17501-6, (2012) Abstract
Microarray-based capture of novel expressed cell type-specific transfrags (CoNECT) to annotate tissue-specific transcription in Drosophila melanogaster., Hong, X., Doddapaneni H., Comeron J. M., Rodesch M. J., Halvensleben H. A., Nien C. Y., Bolei F., Metpally R., Richmond T. A., Albert T. J., et al. , G3 (Bethesda, Md.), 2012 Aug, Volume 2, Issue 8, p.873-82, (2012) Abstract
2011
The complete genome sequence of 'Candidatus Liberibacter solanacearum', the bacterium associated with potato zebra chip disease., Lin, Hong, Lou Binghai, Glynn Jonathan M., Doddapaneni Harshavardhan, Civerolo Edwin L., Chen Chuanwu, Duan Yongping, Zhou Lijuan, and Vahling Cheryl M. , PloS one, 2011, Volume 6, Issue 4, p.e19135, (2011) Abstract


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