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Publications

Journal Article
Differentiation of embryonic stem cells into corneal epithelium., Wang, Zhichong, Ge Jian, Huang Bing, Gao Qianying, Liu Bingqian, Wang Linghua, Yu Ling, Fan Zhigang, Lu Xiaoming, and Liu Jingbo , Science in China. Series C, Life sciences / Chinese Academy of Sciences, 2005 Oct, Volume 48, Issue 5, p.471-80, (2005) Abstract
Direct regulation of GTP homeostasis by (p)ppGpp: a critical component of viability and stress resistance., Kriel, Allison, Bittner Alycia N., Kim Sok Ho, Liu Kuanqing, Tehranchi Ashley K., Zou Winnie Y., Rendon Samantha, Chen Rui, Tu Benjamin P., and Wang Jue D. , Molecular cell, 2012 Oct 26, Volume 48, Issue 2, p.231-41, (2012) Abstract
Direct selection of human genomic loci by microarray hybridization., Albert, Thomas J., Molla Michael N., Muzny Donna M., Nazareth Lynne, Wheeler David, Song Xingzhi, Richmond Todd A., Middle Chris M., Rodesch Matthew J., Packard Charles J., et al. , Nature methods, 2007 Nov, Volume 4, Issue 11, p.903-5, (2007) Abstract
Discovery of novel microRNAs in female reproductive tract using next generation sequencing., Creighton, Chad J., Benham Ashley L., Zhu Huifeng, Khan Mahjabeen F., Reid Jeffrey G., Nagaraja Ankur K., Fountain Michael D., Dziadek Olivia, Han Derek, Ma Lang, et al. , PloS one, 2010, Volume 5, Issue 3, p.e9637, (2010) Abstract
Disruptive TP53 mutation is associated with aggressive disease characteristics in an orthotopic murine model of oral tongue cancer., Sano, Daisuke, Xie Tong-Xin, Ow Thomas J., Zhao Mei, Pickering Curtis R., Zhou Ge, Sandulache Vlad C., Wheeler David A., Gibbs Richard A., Caulin Carlos, et al. , Clinical cancer research : an official journal of the American Association for Cancer Research, 2011 Nov 1, Volume 17, Issue 21, p.6658-70, (2011) Abstract
Dissection of K+ currents in Caenorhabditis elegans muscle cells by genetics and RNA interference., Santi, C. M., Yuan A., Fawcett G., Wang Z. - W., Butler A., Nonet M. L., Wei A., Rojas P., and Salkoff L. , Proceedings of the National Academy of Sciences of the United States of America, 2003 Nov 25, Volume 100, Issue 24, p.14391-6, (2003) Abstract
Dissociation between APOC3 variants, hepatic triglyceride content and insulin resistance., Kozlitina, Julia, Boerwinkle Eric, Cohen Jonathan C., and Hobbs Helen H. , Hepatology (Baltimore, Md.), 2011 Feb, Volume 53, Issue 2, p.467-74, (2011) Abstract
The distribution and mutagenesis of short coding INDELs from 1,128 whole exomes., Challis, Danny, Antunes Lilian, Garrison Erik, Banks Eric, Evani Uday S., Muzny Donna, Poplin Ryan, Gibbs Richard A., Marth Gabor, and Yu Fuli , BMC genomics, 2015 Feb 28, Volume 16, Issue 1, p.143, (2015) Abstract
Diversity of the fsr-gelE region of the Enterococcus faecalis genome but conservation in strains with partial deletions of the fsr operon., Galloway-Peña, Jessica R., Bourgogne Agathe, Qin Xiang, and Murray Barbara E. , Applied and environmental microbiology, 2011 Jan, Volume 77, Issue 2, p.442-51, (2011) Abstract
DNA amplification by the polymerase chain reaction., Gibbs, R. A. , Analytical chemistry, 1990 Jul 1, Volume 62, Issue 13, p.1202-14, (1990) Abstract
DNA binding and modulation of gene expression by the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus., Garber, A. C., Shu M. A., Hu J., and Renne R. , Journal of virology, 2001 Sep, Volume 75, Issue 17, p.7882-92, (2001) Abstract
DNA deletion confined to the iduronate-2-sulfatase promoter abolishes IDS gene expression., Timms, K. M., Huckett L. E., Belmont J. W., Shapira S. K., and Gibbs R. A. , Human mutation, 1998, Volume 11, Issue 2, p.121-6, (1998) Abstract
DNA polymerase III from Escherichia coli cells expressing mutA mistranslator tRNA is error-prone., Al Mamun, Abu Amar M., Marians Kenneth J., and Humayun Zafri M. , The Journal of biological chemistry, 2002 Nov 29, Volume 277, Issue 48, p.46319-27, (2002) Abstract
The DNA sequence and analysis of human chromosome 14., Heilig, Roland, Eckenberg Ralph, Petit Jean-Louis, Fonknechten Núria, Da Silva Corinne, Cattolico Laurence, Levy Michaël, Barbe Valérie, de Berardinis Véronique, Ureta-Vidal Abel, et al. , Nature, 2003 Feb 6, Volume 421, Issue 6923, p.601-7, (2003) Abstract
The DNA sequence of human chromosome 7., Hillier, Ladeana W., Fulton Robert S., Fulton Lucinda A., Graves Tina A., Pepin Kymberlie H., Wagner-McPherson Caryn, Layman Dan, Maas Jason, Jaeger Sara, Walker Rebecca, et al. , Nature, 2003 Jul 10, Volume 424, Issue 6945, p.157-64, (2003) Abstract
The DNA sequence of the human X chromosome., Ross, Mark T., Grafham Darren V., Coffey Alison J., Scherer Steven, McLay Kirsten, Muzny Donna, Platzer Matthias, Howell Gareth R., Burrows Christine, Bird Christine P., et al. , Nature, 2005 Mar 17, Volume 434, Issue 7031, p.325-37, (2005) Abstract
The DNA sequence, annotation and analysis of human chromosome 3., Muzny, Donna M., Scherer Steven E., Kaul Rajinder, Wang Jing, Yu Jun, Sudbrak Ralf, Buhay Christian J., Chen Rui, Cree Andrew, Ding Yan, et al. , Nature, 2006 Apr 27, Volume 440, Issue 7088, p.1194-8, (2006) Abstract
Do echinoderm genomes measure up?, Cameron, Andrew R., Kudtarkar Parul, Gordon Susan M., Worley Kim C., and Gibbs Richard A. , Marine genomics, 2015 Feb 17, (2015) Abstract
A dosage sensitive locus at chromosome Xp21 is involved in male to female sex reversal., Bardoni, B., Zanaria E., Guioli S., Floridia G., Worley K. C., Tonini G., Ferrante E., Chiumello G., McCabe E. R., and Fraccaro M. , Nature genetics, 1994 Aug, Volume 7, Issue 4, p.497-501, (1994) Abstract
Draft genome sequences and description of Lactobacillus rhamnosus strains L31, L34, and L35, Boonma, Prapaporn, Spinler Jennifer K., Qin Xiang, Jittaprasatsin Chutima, Muzny Donna M., Doddapaneni Harsha, Gibbs Richard, Petrosino Joe, Tumwasorn Somying, and Versalovic James , Standards in Genomic Sciences, 02/2014, Volume 9, Issue 3, p.744 - 754, (2014)
Drosophila eyes absent is required for normal cone and pigment cell development., Karandikar, Umesh C., Jin Meng, Jusiak Barbara, Kwak SuJin, Chen Rui, and Mardon Graeme , PloS one, 2014, Volume 9, Issue 7, p.e102143, (2014) Abstract
A Drosophila genetic resource of mutants to study mechanisms underlying human genetic diseases., Yamamoto, Shinya, Jaiswal Manish, Charng Wu-Lin, Gambin Tomasz, Karaca Ender, Mirzaa Ghayda, Wiszniewski Wojciech, Sandoval Hector, Haelterman Nele A., Xiong Bo, et al. , Cell, 2014 Sep 25, Volume 159, Issue 1, p.200-14, (2014) Abstract
The Drosophila melanogaster Genetic Reference Panel., Mackay, Trudy F. C., Richards Stephen, Stone Eric A., Barbadilla Antonio, Ayroles Julien F., Zhu Dianhui, Casillas Sònia, Han Yi, Magwire Michael M., Cridland Julie M., et al. , Nature, 2012 Feb 9, Volume 482, Issue 7384, p.173-8, (2012) Abstract
The Drosophila melanogaster transcriptome by paired-end RNA sequencing., Daines, Bryce, Wang Hui, Wang Liguo, Li Yumei, Han Yi, Emmert David, Gelbart William, Wang Xia, Li Wei, Gibbs Richard, et al. , Genome research, 2011 Feb, Volume 21, Issue 2, p.315-24, (2011) Abstract
Dual regulation and redundant function of two eye-specific enhancers of the Drosophila retinal determination gene dachshund., Pappu, Kartik S., Ostrin Edwin J., Middlebrooks Brooke W., Sili Beril Tavsanli, Chen Rui, Atkins Mardelle R., Gibbs Richard, and Mardon Graeme , Development (Cambridge, England), 2005 Jun, Volume 132, Issue 12, p.2895-905, (2005) Abstract


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