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Publications

2011
Evolution of pleiotropy: epistatic interaction pattern supports a mechanistic model underlying variation in genotype-phenotype map., Pavlicev, Mihaela, Norgard Elizabeth A., Fawcett Gloria L., and Cheverud James M. , Journal of experimental zoology. Part B, Molecular and developmental evolution, 2011 Jul 15, Volume 316, Issue 5, p.371-85, (2011) Abstract
Association between somatostatin receptor 5 gene polymorphisms and pancreatic cancer risk and survival., Li, Donghui, Tanaka Motofumi, Brunicardi Charles F., Fisher William E., Gibbs Richard A., and Gingras Marie-Claude , Cancer, 2011 Jul 1, Volume 117, Issue 13, p.2863-72, (2011) Abstract
Association studies for next-generation sequencing., Luo, Li, Boerwinkle Eric, and Xiong Momiao , Genome research, 2011 Jul, Volume 21, Issue 7, p.1099-108, (2011) Abstract
Comparative and demographic analysis of orang-utan genomes., Locke, Devin P., Hillier Ladeana W., Warren Wesley C., Worley Kim C., Nazareth Lynne V., Muzny Donna M., Yang Shiaw-Pyng, Wang Zhengyuan, Chinwalla Asif T., Minx Pat, et al. , Nature, 2011 Jan 27, Volume 469, Issue 7331, p.529-33, (2011) Abstract
Diet-dependent genetic and genomic imprinting effects on obesity in mice., Cheverud, James M., Lawson Heather A., Fawcett Gloria L., Wang Bing, Pletscher Susan L., R Fox Ashley, Maxwell Taylor J., Ehrich Thomas H., Kenney-Hunt Jane P., Wolf Jason B., et al. , Obesity (Silver Spring, Md.), 2011 Jan, Volume 19, Issue 1, p.160-70, (2011) Abstract
Diversity of the fsr-gelE region of the Enterococcus faecalis genome but conservation in strains with partial deletions of the fsr operon., Galloway-Peña, Jessica R., Bourgogne Agathe, Qin Xiang, and Murray Barbara E. , Applied and environmental microbiology, 2011 Jan, Volume 77, Issue 2, p.442-51, (2011) Abstract
Identification of genetic susceptibility to childhood cancer through analysis of genes in parallel., Plon, Sharon E., Wheeler David A., Strong Louise C., Tomlinson Gail E., Pirics Michael, Meng Qingchang, Cheung Hannah C., Begin Phyllis R., Muzny Donna M., Lewis Lora, et al. , Cancer genetics, 2011 Jan, Volume 204, Issue 1, p.19-25, (2011) Abstract
Genome-sequencing anniversary. Bringing genomics and genetics back together., Gibbs, Richard A. , Science (New York, N.Y.), 2011 Feb 4, Volume 331, Issue 6017, p.548, (2011)
PDX-1: demonstration of oncogenic properties in pancreatic cancer., Liu, Shi-He, Patel Sanjeet, Gingras Marie-Claude, Nemunaitis John, Zhou Guisheng, Chen Changyi, Li Min, Fisher William, Gibbs Richard, and Brunicardi Charles F. , Cancer, 2011 Feb 15, Volume 117, Issue 4, p.723-33, (2011) Abstract
Cortical sulcal areas in baboons (Papio hamadryas spp.) with generalized interictal epileptic discharges on scalp EEG., Szabó, C. A., Kochunov P., Knape K. D., McCoy K. J. M., Leland M. M., Lancaster J. L., Fox P. T., Williams J. T., and Rogers J. , Epilepsy research, 2011 Feb, Volume 93, Issue 2-3, p.91-5, (2011) Abstract
Dissociation between APOC3 variants, hepatic triglyceride content and insulin resistance., Kozlitina, Julia, Boerwinkle Eric, Cohen Jonathan C., and Hobbs Helen H. , Hepatology (Baltimore, Md.), 2011 Feb, Volume 53, Issue 2, p.467-74, (2011) Abstract
The Drosophila melanogaster transcriptome by paired-end RNA sequencing., Daines, Bryce, Wang Hui, Wang Liguo, Li Yumei, Han Yi, Emmert David, Gelbart William, Wang Xia, Li Wei, Gibbs Richard, et al. , Genome research, 2011 Feb, Volume 21, Issue 2, p.315-24, (2011) Abstract
Familial thoracic aortic aneurysms and dissections: identification of a novel locus for stable aneurysms with a low risk for progression to aortic dissection., Guo, Dong-Chuan, Regalado Ellen S., Minn Charles, Tran-Fadulu Van, Coney Joshua, Cao Jiumei, Wang Min, Yu Robert K., Estrera Anthony L., Safi Hazim J., et al. , Circulation. Cardiovascular genetics, 2011 Feb, Volume 4, Issue 1, p.36-42, (2011) Abstract
Is low-grade serous ovarian cancer part of the tumor spectrum of hereditary breast and ovarian cancer?, Vineyard, Marisa A., Daniels Molly S., Urbauer Diana L., Deavers Michael T., Sun Charlotte C., Boerwinkle Eric, Bodurka Diane C., Gershenson David M., Crawford Jessica, and Lu Karen H. , Gynecologic oncology, 2011 Feb, Volume 120, Issue 2, p.229-32, (2011) Abstract
Genome-wide high-density SNP linkage search for glioma susceptibility loci: results from the Gliogene Consortium., Shete, Sanjay, Lau Ching C., Houlston Richard S., Claus Elizabeth B., Barnholtz-Sloan Jill, Lai Rose, Il'yasova Dora, Schildkraut Joellen, Sadetzki Siegal, Johansen Christoffer, et al. , Cancer research, 2011 Dec 15, Volume 71, Issue 24, p.7568-75, (2011) Abstract
Global DNA methylation and risk of subclinical atherosclerosis in young adults: the Pathobiological Determinants of Atherosclerosis in Youth (PDAY) study., Bressler, Jan, Shimmin Lawrence C., Boerwinkle Eric, and Hixson James E. , Atherosclerosis, 2011 Dec, Volume 219, Issue 2, p.958-62, (2011) Abstract
SSTR5 P335L monoclonal antibody differentiates pancreatic neuroendocrine neuroplasms with different SSTR5 genotypes., Zhou, Guisheng, Gingras Marie-Claude, Liu Shi-He, Sanchez Robbi, Edwards Dean, Dawson David, Christensen Kurt, Paganelli Giovanni, Gibbs Richard, Fisher William, et al. , Surgery, 2011 Dec, Volume 150, Issue 6, p.1136-42, (2011) Abstract
Whole-exome sequencing identifies ALMS1, IQCB1, CNGA3, and MYO7A mutations in patients with Leber congenital amaurosis., Wang, Xia, Wang Hui, Cao Ming, Li Zhe, Chen Xianfeng, Patenia Claire, Gore Athurva, Abboud Emad B., Al-Rajhi Ali A., Lewis Richard A., et al. , Human mutation, 2011 Dec, Volume 32, Issue 12, p.1450-9, (2011) Abstract
Exome sequencing of head and neck squamous cell carcinoma reveals inactivating mutations in NOTCH1., Agrawal, Nishant, Frederick Mitchell J., Pickering Curtis R., Bettegowda Chetan, Chang Kyle, Li Ryan J., Fakhry Carole, Xie Tong-Xin, Zhang Jiexin, Wang Jing, et al. , Science (New York, N.Y.), 2011 Aug 26, Volume 333, Issue 6046, p.1154-7, (2011) Abstract
Building a comprehensive genomic program for hepatocellular carcinoma., Harring, Theresa R., Guiteau Jacfranz J., Nguyen Thao N. T., Cotton Ron T., Gingras Marie-Claude, Wheeler David A., O'Mahony Christine A., Gibbs Richard A., Brunicardi Charles F., and Goss John A. , World journal of surgery, 2011 Aug, Volume 35, Issue 8, p.1746-50, (2011) Abstract
dbNSFP: a lightweight database of human nonsynonymous SNPs and their functional predictions., Liu, Xiaoming, Jian Xueqiu, and Boerwinkle Eric , Human mutation, 2011 Aug, Volume 32, Issue 8, p.894-9, (2011) Abstract
Genetical genomics of Th1 and Th2 immune response in a baboon model of atherosclerosis risk factors., Vinson, A., Curran J. E., Johnson M. P., Dyer T. D., Moses E. K., Blangero J., Cox L. A., Rogers J., Havill L. M., VandeBerg J. L., et al. , Atherosclerosis, 2011 Aug, Volume 217, Issue 2, p.387-94, (2011) Abstract
Genome-wide association analysis of incident coronary heart disease (CHD) in African Americans: a short report., Barbalic, Maja, Reiner Alex P., Wu Chunyuan, Hixson James E., Franceschini Nora, Eaton Charles B., Heiss Gerardo, Couper David, Mosley Thomas, and Boerwinkle Eric , PLoS genetics, 2011 Aug, Volume 7, Issue 8, p.e1002199, (2011) Abstract
The hypofunctional effect of P335L single nucleotide polymorphism on SSTR5 function., Zhou, Guisheng, Gingras Marie-Claude, Liu Shi-He, Li Donghui, Li Zhijun, Catania Robbi L., Stehling Kelly M., Li Min, Paganelli Giovanni, Gibbs Richard A., et al. , World journal of surgery, 2011 Aug, Volume 35, Issue 8, p.1715-24, (2011) Abstract
Long-range massively parallel mate pair sequencing detects distinct mutations and similar patterns of structural mutability in two breast cancer cell lines., Hampton, Oliver A., Koriabine Maxim, Miller Christopher A., Coarfa Cristian, Li Jian, Den Hollander Petra, Schoenherr Caroline, Carbone Lucia, Nefedov Mikhail, Ten Hallers Boudewijn F. H., et al. , Cancer genetics, 2011 Aug, Volume 204, Issue 8, p.447-57, (2011) Abstract


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