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Publications

2010
Evidence that multiple genetic variants of MC4R play a functional role in the regulation of energy expenditure and appetite in Hispanic children., Cole, Shelley A., Butte Nancy F., Voruganti Saroja V., Cai Guowen, Haack Karin, Kent Jack W., Blangero John, Comuzzie Anthony G., McPherson John D., and Gibbs Richard A. , The American journal of clinical nutrition, 2010 Jan, Volume 91, Issue 1, p.191-9, (2010) Abstract
Sequencing technologies - the next generation., Metzker, Michael L. , Nature reviews. Genetics, 2010 Jan, Volume 11, Issue 1, p.31-46, (2010) Abstract
Complete Khoisan and Bantu genomes from southern Africa., Schuster, Stephan C., Miller Webb, Ratan Aakrosh, Tomsho Lynn P., Giardine Belinda, Kasson Lindsay R., Harris Robert S., Petersen Desiree C., Zhao Fangqing, Qi Ji, et al. , Nature, 2010 Feb 18, Volume 463, Issue 7283, p.943-7, (2010) Abstract
Diabetes genes and prostate cancer in the Atherosclerosis Risk in Communities study., Meyer, Tamra E., Boerwinkle Eric, Morrison Alanna C., Volcik Kelly A., Sanderson Maureen, Coker Ann L., Pankow James S., and Folsom Aaron R. , Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology, 2010 Feb, Volume 19, Issue 2, p.558-65, (2010) Abstract
Genome sequence of the pea aphid Acyrthosiphon pisum., , PLoS biology, 2010 Feb, Volume 8, Issue 2, p.e1000313, (2010) Abstract
A SNP discovery method to assess variant allele probability from next-generation resequencing data., Shen, Yufeng, Wan Zhengzheng, Coarfa Cristian, Drabek Rafal, Chen Lei, Ostrowski Elizabeth A., Liu Yue, Weinstock George M., Wheeler David A., Gibbs Richard A., et al. , Genome research, 2010 Feb, Volume 20, Issue 2, p.273-80, (2010) Abstract
Source identification in two criminal cases using phylogenetic analysis of HIV-1 DNA sequences., Scaduto, Diane I., Brown Jeremy M., Haaland Wade C., Zwickl Derrick J., Hillis David M., and Metzker Michael L. , Proceedings of the National Academy of Sciences of the United States of America, 2010 Dec 14, Volume 107, Issue 50, p.21242-7, (2010) Abstract
Identification and removal of colanic acid from plasmid DNA preparations: implications for gene therapy., Firozi, P., Zhang W., Chen L., Quiocho F. A., Worley K. C., and Templeton N. S. , Gene therapy, 2010 Dec, Volume 17, Issue 12, p.1484-99, (2010) Abstract
Interactions of dietary whole-grain intake with fasting glucose- and insulin-related genetic loci in individuals of European descent: a meta-analysis of 14 cohort studies., Nettleton, Jennifer A., McKeown Nicola M., Kanoni Stavroula, Lemaitre Rozenn N., Hivert Marie-France, Ngwa Julius, van Rooij Frank J. A., Sonestedt Emily, Wojczynski Mary K., Ye Zheng, et al. , Diabetes care, 2010 Dec, Volume 33, Issue 12, p.2684-91, (2010) Abstract
Amygdalar and hippocampal substrates of anxious temperament differ in their heritability., Oler, Jonathan A., Fox Andrew S., Shelton Steven E., Rogers Jeffrey, Dyer Thomas D., Davidson Richard J., Shelledy Wendy, Oakes Terrence R., Blangero John, and Kalin Ned H. , Nature, 2010 Aug 12, Volume 466, Issue 7308, p.864-8, (2010) Abstract
Association of glycemic index and glycemic load with risk of incident coronary heart disease among Whites and African Americans with and without type 2 diabetes: the Atherosclerosis Risk in Communities study., Hardy, Dale S., Hoelscher Deanna M., Aragaki Corinne, Stevens June, Steffen Lyn M., Pankow James S., and Boerwinkle Eric , Annals of epidemiology, 2010 Aug, Volume 20, Issue 8, p.610-6, (2010) Abstract
Common INSIG2 polymorphisms are associated with age-related changes in body size and high-density lipoprotein cholesterol from young adulthood to middle age., Fornage, Myriam, Papanicolaou George, Lewis Cora E., Boerwinkle Eric, and Siscovick David S. , Metabolism: clinical and experimental, 2010 Aug, Volume 59, Issue 8, p.1084-91, (2010) Abstract
Genome-wide association studies of serum magnesium, potassium, and sodium concentrations identify six Loci influencing serum magnesium levels., Meyer, Tamra E., Verwoert Germaine C., Hwang Shih-Jen, Glazer Nicole L., Smith Albert V., van Rooij Frank J. A., Ehret Georg B., Boerwinkle Eric, Felix Janine F., Leak Tennille S., et al. , PLoS genetics, 2010 Aug, Volume 6, Issue 8, (2010) Abstract
Phosphorylation of the mutant K303R estrogen receptor alpha at serine 305 affects aromatase inhibitor sensitivity., Barone, I., Iacopetta D., Covington K. R., Cui Y., Tsimelzon A., Beyer A., Andò S., and Fuqua S. A. W. , Oncogene, 2010 Apr 22, Volume 29, Issue 16, p.2404-14, (2010) Abstract
Phosphorylation of the mutant K303R estrogen receptor alpha at serine 305 affects aromatase inhibitor sensitivity., Barone, I., Iacopetta D., Covington K. R., Cui Y., Tsimelzon A., Beyer A., Andò S., and Fuqua S. A. W. , Oncogene, 2010 Apr 22, Volume 29, Issue 16, p.2404-14, (2010) Abstract
Whole-genome sequencing in a patient with Charcot-Marie-Tooth neuropathy., Lupski, James R., Reid Jeffrey G., Gonzaga-Jauregui Claudia, Rio Deiros David, Chen David C. Y., Nazareth Lynne, Bainbridge Matthew, Dinh Huyen, Jing Chyn, Wheeler David A., et al. , The New England journal of medicine, 2010 Apr 1, Volume 362, Issue 13, p.1181-91, (2010) Abstract
The fms21 (pilA)-fms20 locus encoding one of four distinct pili of Enterococcus faecium is harboured on a large transferable plasmid associated with gut colonization and virulence., Kim, David S., Singh Kavindra V., Nallapareddy Sreedhar R., Qin Xiang, Panesso Diana, Arias Cesar A., and Murray Barbara E. , Journal of medical microbiology, 2010 Apr, Volume 59, Issue Pt 4, p.505-7, (2010)
A new diagnostic system for ultra-sensitive and specific detection and quantification of Candidatus Liberibacter asiaticus, the bacterium associated with citrus Huanglongbing., Lin, Hong, Chen Chuanwu, Doddapaneni Harshavardhan, Duan Yongping, Civerolo Edwin L., Bai Xianjin, and Zhao Xiaolong , Journal of microbiological methods, 2010 Apr, Volume 81, Issue 1, p.17-25, (2010) Abstract
Bayesian estimation of genomic copy number with single nucleotide polymorphism genotyping arrays., Guo, Beibei, Villagran Alejandro, Vannucci Marina, Wang Jian, Davis Caleb F., Man Tsz-Kwong, Lau Ching, and Guerra Rudy , BMC research notes, 2010, Volume 3, p.350, (2010) Abstract
Comparative genomics of Gardnerella vaginalis strains reveals substantial differences in metabolic and virulence potential., Yeoman, Carl J., Yildirim Suleyman, Thomas Susan M., Durkin Scott A., Torralba Manolito, Sutton Granger, Buhay Christian J., Ding Yan, Dugan-Rocha Shannon P., Muzny Donna M., et al. , PloS one, 2010, Volume 5, Issue 8, p.e12411, (2010) Abstract
Deep resequencing reveals excess rare recent variants consistent with explosive population growth., Coventry, Alex, Bull-Otterson Lara M., Liu Xiaoming, Clark Andrew G., Maxwell Taylor J., Crosby Jacy, Hixson James E., Rea Thomas J., Muzny Donna M., Lewis Lora R., et al. , Nature communications, 2010, Volume 1, p.131, (2010) Abstract
Discovery of novel microRNAs in female reproductive tract using next generation sequencing., Creighton, Chad J., Benham Ashley L., Zhu Huifeng, Khan Mahjabeen F., Reid Jeffrey G., Nagaraja Ankur K., Fountain Michael D., Dziadek Olivia, Han Derek, Ma Lang, et al. , PloS one, 2010, Volume 5, Issue 3, p.e9637, (2010) Abstract
Genetic diversity in India and the inference of Eurasian population expansion., Xing, Jinchuan, Watkins Scott W., Hu Ya, Huff Chad D., Sabo Aniko, Muzny Donna M., Bamshad Michael J., Gibbs Richard A., Jorde Lynn B., and Yu Fuli , Genome biology, 2010, Volume 11, Issue 11, p.R113, (2010) Abstract
Human Lymphatic Architecture and Dynamic Transport Imaged Using Near-infrared Fluorescence., Rasmussen, John C., Tan I-Chih, Marshall Milton V., Adams Kristen E., Kwon Sunkuk, Fife Caroline E., Maus Erik A., Smith Latisha A., Covington Kyle R., and Sevick-Muraca Eva M. , Translational oncology, 2010, Volume 3, Issue 6, p.362-72, (2010) Abstract
Risk of type 2 diabetes and obesity is differentially associated with variation in FTO in whites and African-Americans in the ARIC study., Bressler, Jan, Kao Linda W. H., Pankow James S., and Boerwinkle Eric , PloS one, 2010, Volume 5, Issue 5, p.e10521, (2010) Abstract


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