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Publications

2011
Gastrointestinal microbiome signatures of pediatric patients with irritable bowel syndrome., Saulnier, Delphine M., Riehle Kevin, Mistretta Toni-Ann, Diaz Maria-Alejandra, Mandal Debasmita, Raza Sabeen, Weidler Erica M., Qin Xiang, Coarfa Cristian, Milosavljevic Aleksandar, et al. , Gastroenterology, 2011 Nov, Volume 141, Issue 5, p.1782-91, (2011) Abstract
Interaction of folate intake and the paraoxonase Q192R polymorphism with risk of incident coronary heart disease and ischemic stroke: the atherosclerosis risk in communities study., Luu, Hung N., Kingah Pascal L., North Kari, Boerwinkle Eric, and Volcik Kelly A. , Annals of epidemiology, 2011 Nov, Volume 21, Issue 11, p.815-23, (2011) Abstract
High-resolution characterization of a hepatocellular carcinoma genome., Totoki, Yasushi, Tatsuno Kenji, Yamamoto Shogo, Arai Yasuhito, Hosoda Fumie, Ishikawa Shumpei, Tsutsumi Shuichi, Sonoda Kohtaro, Totsuka Hirohiko, Shirakihara Takuya, et al. , Nature genetics, 2011 May, Volume 43, Issue 5, p.464-9, (2011) Abstract
Immunoglobulin locus associates with serum IgG levels and albuminuria., Herring, Stacy M., Gokul Nisha, Monita Monique, Bell Rebecca, Boerwinkle Eric, Wenderfer Scott E., Braun Michael C., and Doris Peter A. , Journal of the American Society of Nephrology : JASN, 2011 May, Volume 22, Issue 5, p.881-9, (2011) Abstract
Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications., Yilmaz, Pelin, Kottmann Renzo, Field Dawn, Knight Rob, Cole James R., Amaral-Zettler Linda, Gilbert Jack A., Karsch-Mizrachi Ilene, Johnston Anjanette, Cochrane Guy, et al. , Nature biotechnology, 2011 May, Volume 29, Issue 5, p.415-20, (2011) Abstract
Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase., Sun, Tingting, Aceto Nicola, Meerbrey Kristen L., Kessler Jessica D., Zhou Chunshui, Migliaccio Ilenia, Nguyen Don X., Pavlova Natalya N., Botero Maria, Huang Jian, et al. , Cell, 2011 Mar 4, Volume 144, Issue 5, p.703-18, (2011) Abstract
Kinda baboons (Papio kindae) and grayfoot chacma baboons (P. ursinus griseipes) hybridize in the Kafue river valley, Zambia., Jolly, C. J., Burrell A. S., Phillips-Conroy J. E., Bergey C., and Rogers J. , American journal of primatology, 2011 Mar, Volume 73, Issue 3, p.291-303, (2011) Abstract
TTC21B contributes both causal and modifying alleles across the ciliopathy spectrum., Davis, Erica E., Zhang Qi, Liu Qin, Diplas Bill H., Davey Lisa M., Hartley Jane, Stoetzel Corinne, Szymanska Katarzyna, Ramaswami Gokul, Logan Clare V., et al. , Nature genetics, 2011 Mar, Volume 43, Issue 3, p.189-96, (2011) Abstract
Integrated genomic analyses of ovarian carcinoma., , Nature, 2011 Jun 30, Volume 474, Issue 7353, p.609-15, (2011) Abstract
Exome sequencing of ion channel genes reveals complex profiles confounding personal risk assessment in epilepsy., Klassen, Tara, Davis Caleb F., Goldman Alica, Burgess Dan, Chen Tim, Wheeler David, McPherson John, Bourquin Traci, Lewis Lora, Villasana Donna, et al. , Cell, 2011 Jun 24, Volume 145, Issue 7, p.1036-48, (2011) Abstract
Whole-genome sequencing for optimized patient management., Bainbridge, Matthew N., Wiszniewski Wojciech, Murdock David R., Friedman Jennifer, Gonzaga-Jauregui Claudia, Newsham Irene, Reid Jeffrey G., Fink John K., Morgan Margaret B., Gingras Marie-Claude, et al. , Science translational medicine, 2011 Jun 15, Volume 3, Issue 87, p.87re3, (2011) Abstract
Genome-wide association studies of cerebral white matter lesion burden: the CHARGE consortium., Fornage, Myriam, Debette Stephanie, Bis Joshua C., Schmidt Helena, Ikram Arfan M., Dufouil Carole, Sigurdsson Sigurdur, Lumley Thomas, DeStefano Anita L., Fazekas Franz, et al. , Annals of neurology, 2011 Jun, Volume 69, Issue 6, p.928-39, (2011) Abstract
High-resolution identity by descent mapping uncovers the genetic basis for blood pressure differences between spontaneously hypertensive rat lines., Bell, Rebecca, Herring Stacy M., Gokul Nisha, Monita Monique, Grove Megan L., Boerwinkle Eric, and Doris Peter A. , Circulation. Cardiovascular genetics, 2011 Jun, Volume 4, Issue 3, p.223-31, (2011) Abstract
Recurrent chromosome 16p13.1 duplications are a risk factor for aortic dissections., Kuang, Shao-Qing, Guo Dong-Chuan, Prakash Siddharth K., McDonald Merry-Lynn N., Johnson Ralph J., Wang Min, Regalado Ellen S., Russell Ludivine, Cao Jiu-Mei, Kwartler Callie, et al. , PLoS genetics, 2011 Jun, Volume 7, Issue 6, p.e1002118, (2011) Abstract
Demographic history and rare allele sharing among human populations., Gravel, Simon, Henn Brenna M., Gutenkunst Ryan N., Indap Amit R., Marth Gabor T., Clark Andrew G., Yu Fuli, Gibbs Richard A., and Bustamante Carlos D. , Proceedings of the National Academy of Sciences of the United States of America, 2011 Jul 19, Volume 108, Issue 29, p.11983-8, (2011) Abstract
Evolution of pleiotropy: epistatic interaction pattern supports a mechanistic model underlying variation in genotype-phenotype map., Pavlicev, Mihaela, Norgard Elizabeth A., Fawcett Gloria L., and Cheverud James M. , Journal of experimental zoology. Part B, Molecular and developmental evolution, 2011 Jul 15, Volume 316, Issue 5, p.371-85, (2011) Abstract
Association between somatostatin receptor 5 gene polymorphisms and pancreatic cancer risk and survival., Li, Donghui, Tanaka Motofumi, Brunicardi Charles F., Fisher William E., Gibbs Richard A., and Gingras Marie-Claude , Cancer, 2011 Jul 1, Volume 117, Issue 13, p.2863-72, (2011) Abstract
Association studies for next-generation sequencing., Luo, Li, Boerwinkle Eric, and Xiong Momiao , Genome research, 2011 Jul, Volume 21, Issue 7, p.1099-108, (2011) Abstract
Comparative and demographic analysis of orang-utan genomes., Locke, Devin P., Hillier Ladeana W., Warren Wesley C., Worley Kim C., Nazareth Lynne V., Muzny Donna M., Yang Shiaw-Pyng, Wang Zhengyuan, Chinwalla Asif T., Minx Pat, et al. , Nature, 2011 Jan 27, Volume 469, Issue 7331, p.529-33, (2011) Abstract
Diet-dependent genetic and genomic imprinting effects on obesity in mice., Cheverud, James M., Lawson Heather A., Fawcett Gloria L., Wang Bing, Pletscher Susan L., R Fox Ashley, Maxwell Taylor J., Ehrich Thomas H., Kenney-Hunt Jane P., Wolf Jason B., et al. , Obesity (Silver Spring, Md.), 2011 Jan, Volume 19, Issue 1, p.160-70, (2011) Abstract
Diversity of the fsr-gelE region of the Enterococcus faecalis genome but conservation in strains with partial deletions of the fsr operon., Galloway-Peña, Jessica R., Bourgogne Agathe, Qin Xiang, and Murray Barbara E. , Applied and environmental microbiology, 2011 Jan, Volume 77, Issue 2, p.442-51, (2011) Abstract
Identification of genetic susceptibility to childhood cancer through analysis of genes in parallel., Plon, Sharon E., Wheeler David A., Strong Louise C., Tomlinson Gail E., Pirics Michael, Meng Qingchang, Cheung Hannah C., Begin Phyllis R., Muzny Donna M., Lewis Lora, et al. , Cancer genetics, 2011 Jan, Volume 204, Issue 1, p.19-25, (2011) Abstract
Genome-sequencing anniversary. Bringing genomics and genetics back together., Gibbs, Richard A. , Science (New York, N.Y.), 2011 Feb 4, Volume 331, Issue 6017, p.548, (2011)
PDX-1: demonstration of oncogenic properties in pancreatic cancer., Liu, Shi-He, Patel Sanjeet, Gingras Marie-Claude, Nemunaitis John, Zhou Guisheng, Chen Changyi, Li Min, Fisher William, Gibbs Richard, and Brunicardi Charles F. , Cancer, 2011 Feb 15, Volume 117, Issue 4, p.723-33, (2011) Abstract
Cortical sulcal areas in baboons (Papio hamadryas spp.) with generalized interictal epileptic discharges on scalp EEG., Szabó, C. A., Kochunov P., Knape K. D., McCoy K. J. M., Leland M. M., Lancaster J. L., Fox P. T., Williams J. T., and Rogers J. , Epilepsy research, 2011 Feb, Volume 93, Issue 2-3, p.91-5, (2011) Abstract


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