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Publications

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J
Single-Molecule Sequencing Reveals Estrogen-Regulated Clinically Relevant lncRNAs in Breast Cancer., Jonsson, Philip, Coarfa Cristian, Mesmar Fahmi, Raz Tal, Rajapakshe Kimal, Thompson John F., Gunaratne Preethi H., and Williams Cecilia , Molecular endocrinology (Baltimore, Md.), 2015 Nov, Volume 29, Issue 11, p.1634-45, (2015) Abstract
Genomic organization of the mouse double minute 2 gene., Jones, S. N., Ansari-Lari M. A., Hancock A. R., Jones W. J., Gibbs R. A., Donehower L. A., and Bradley A. , Gene, 1996 Oct 10, Volume 175, Issue 1-2, p.209-13, (1996) Abstract
Kinda baboons (Papio kindae) and grayfoot chacma baboons (P. ursinus griseipes) hybridize in the Kafue river valley, Zambia., Jolly, C. J., Burrell A. S., Phillips-Conroy J. E., Bergey C., and Rogers J. , American journal of primatology, 2011 Mar, Volume 73, Issue 3, p.291-303, (2011) Abstract
Recurrent duplication-driven transposition of DNA during hominoid evolution., Johnson, Matthew E., Cheng Ze, Morrison Anne V., Scherer Steven, Ventura Mario, Gibbs Richard A., Green Eric D., and Eichler Evan E. , Proceedings of the National Academy of Sciences of the United States of America, 2006 Nov 21, Volume 103, Issue 47, p.17626-31, (2006) Abstract
Genetic influences on response to novel objects and dimensions of personality in papio baboons., Johnson, Zachary, Brent Linda, Alvarenga Juan Carlos, Comuzzie Anthony G., Shelledy Wendy, Ramirez Stephanie, Cox Laura, Mahaney Michael C., Huang Yung-Yu, Mann John J., et al. , Behavior genetics, 2015 Mar, Volume 45, Issue 2, p.215-27, (2015) Abstract
Beta 2 adrenergic receptor 5' haplotypes influence promoter activity., Johnatty, Sharon E., Abdellatif Maha, Shimmin Lawrence, Clark Richard B., and Boerwinkle Eric , British journal of pharmacology, 2002 Dec, Volume 137, Issue 8, p.1213-6, (2002) Abstract
Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway., Jin, Peng, Zarnescu Daniela C., Ceman Stephanie, Nakamoto Mika, Mowrey Julie, Jongens Thomas A., Nelson David L., Moses Kevin, and Warren Stephen T. , Nature neuroscience, 2004 Feb, Volume 7, Issue 2, p.113-7, (2004) Abstract
Infection of a yellow baboon with simian immunodeficiency virus from African green monkeys: evidence for cross-species transmission in the wild., Jin, M. J., Rogers J., Phillips-Conroy J. E., Allan J. S., Desrosiers R. C., Shaw G. M., Sharp P. M., and Hahn B. H. , Journal of virology, 1994 Dec, Volume 68, Issue 12, p.8454-60, (1994) Abstract
Comprehensive molecular diagnosis of 67 Chinese Usher syndrome probands: high rate of ethnicity specific mutations in Chinese USH patients., Jiang, Lichun, Liang Xiaofang, Li Yumei, Wang Jing, Zaneveld Jacques Eric, Wang Hui, Xu Shan, Wang Keqing, Wang Binbin, Chen Rui, et al. , Orphanet journal of rare diseases, 2015, Volume 10, Issue 1, p.110, (2015) Abstract
The sheep genome illuminates biology of the rumen and lipid metabolism., Jiang, Yu, Xie Min, Chen Wenbin, Talbot Richard, Maddox Jillian F., Faraut Thomas, Wu Chunhua, Muzny Donna M., Li Yuxiang, Zhang Wenguang, et al. , Science (New York, N.Y.), 2014 Jun 6, Volume 344, Issue 6188, p.1168-73, (2014) Abstract
Large conserved domains of low DNA methylation maintained by Dnmt3a., Jeong, Mira, Sun Deqiang, Luo Min, Huang Yun, Challen Grant A., Rodriguez Benjamin, Zhang Xiaotian, Chavez Lukas, Wang Hui, Hannah Rebecca, et al. , Nature genetics, 2014 Jan, Volume 46, Issue 1, p.17-23, (2014) Abstract
A visual and curatorial approach to clinical variant prioritization and disease gene discovery in genome-wide diagnostics., James, Regis A., Campbell Ian M., Chen Edward S., Boone Philip M., Rao Mitchell A., Bainbridge Matthew N., Lupski James R., Yang Yaping, Eng Christine M., Posey Jennifer E., et al. , Genome medicine, 2016, Volume 8, Issue 1, p.13, (2016) Abstract
Targeted sequencing in chromosome 17q linkage region identifies familial glioma candidates in the Gliogene Consortium., Jalali, Ali, Amirian Susan E., Bainbridge Matthew N., Armstrong Georgina N., Liu Yanhong, Tsavachidis Spyros, Jhangiani Shalini N., Plon Sharon E., Lau Ching C., Claus Elizabeth B., et al. , Scientific reports, 2015, Volume 5, p.8278, (2015) Abstract
Test of the potential of a dATP surrogate for sequencing via MALDI-MS., Jacutin, S., Zhang A. J., Russell D. H., Gibbs R. A., and Burgess K. , Nucleic acids research, 1997 Dec 15, Volume 25, Issue 24, p.5072-6, (1997) Abstract
Finishing the euchromatic sequence of the human genome., , Nature, 2004 Oct 21, Volume 431, Issue 7011, p.931-45, (2004) Abstract
F
A second generation human haplotype map of over 3.1 million SNPs., Frazer, Kelly A., Ballinger Dennis G., Cox David R., Hinds David A., Stuve Laura L., Gibbs Richard A., Belmont John W., Boudreau Andrew, Hardenbol Paul, Leal Suzanne M., et al. , Nature, 2007 Oct 18, Volume 449, Issue 7164, p.851-61, (2007) Abstract
Integrating ethics and science in the International HapMap Project., , Nature reviews. Genetics, 2004 Jun, Volume 5, Issue 6, p.467-75, (2004)
The International HapMap Project., , Nature, 2003 Dec 18, Volume 426, Issue 6968, p.789-96, (2003) Abstract
A haplotype map of the human genome., , Nature, 2005 Oct 27, Volume 437, Issue 7063, p.1299-320, (2005) Abstract
A
Integrating common and rare genetic variation in diverse human populations., Altshuler, David M., Gibbs Richard A., Peltonen Leena, Altshuler David M., Gibbs Richard A., Peltonen Leena, Dermitzakis Emmanouil, Schaffner Stephen F., Yu Fuli, Peltonen Leena, et al. , Nature, 2010 Sep 2, Volume 467, Issue 7311, p.52-8, (2010) Abstract
Genome sequence of the pea aphid Acyrthosiphon pisum., , PLoS biology, 2010 Feb, Volume 8, Issue 2, p.e1000313, (2010) Abstract
I
Genome-wide single nucleotide polymorphism arrays as a diagnostic tool in patients with synchronous endometrial and ovarian cancer., Ikeda, Yuji, Oda Katsutoshi, Nakagawa Shunsuke, Murayama-Hosokawa Satsuki, Yamamoto Shogo, Ishikawa Shumpei, Wang Linghua, Takazawa Yutaka, Maeda Daichi, Wada-Hiraike Osamu, et al. , International journal of gynecological cancer : official journal of the International Gynecological Cancer Society, 2012 Jun, Volume 22, Issue 5, p.725-31, (2012) Abstract
H
Nasopharyngeal Proteobacteria are associated with viral etiology and acute wheezing in children with severe bronchiolitis., Hyde, Embriette R., Petrosino Joseph F., Piedra Pedro A., Camargo Carlos A., Espinola Janice A., and Mansbach Jonathan M. , The Journal of allergy and clinical immunology, 2014 Apr, Volume 133, Issue 4, p.1220-1222.e3, (2014)
Sequencing and functional analysis of the SNRPN promoter: in vitro methylation abolishes promoter activity., Huq, A. H., Sutcliffe J. S., Nakao M., Shen Y., Gibbs R. A., and Beaudet A. L. , Genome research, 1997 Jun, Volume 7, Issue 6, p.642-8, (1997) Abstract


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