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Publications

2004
Fxr1 knockout mice show a striated muscle phenotype: implications for Fxr1p function in vivo., Mientjes, Edwin J., Willemsen Rob, Kirkpatrick Laura L., Nieuwenhuizen Ingeborg M., Hoogeveen-Westerveld Marianne, Verweij Marcel, Reis Surya, Bardoni Barbara, Hoogeveen Andre T., Oostra Ben A., et al. , Human molecular genetics, 2004 Jul 1, Volume 13, Issue 13, p.1291-302, (2004) Abstract
Polymorphism of the soluble epoxide hydrolase is associated with coronary artery calcification in African-American subjects: The Coronary Artery Risk Development in Young Adults (CARDIA) study., Fornage, Myriam, Boerwinkle Eric, Doris Peter A., Jacobs David, Liu Kiang, and Wong Nathan D. , Circulation, 2004 Jan 27, Volume 109, Issue 3, p.335-9, (2004) Abstract
WormBase: a multi-species resource for nematode biology and genomics., Harris, Todd W., Chen Nansheng, Cunningham Fiona, Tello-Ruiz Marcela, Antoshechkin Igor, Bastiani Carol, Bieri Tamberlyn, Blasiar Darin, Bradnam Keith, Chan Juancarlos, et al. , Nucleic acids research, 2004 Jan 1, Volume 32, Issue Database issue, p.D411-7, (2004) Abstract
Biochemical and genetic interaction between the fragile X mental retardation protein and the microRNA pathway., Jin, Peng, Zarnescu Daniela C., Ceman Stephanie, Nakamoto Mika, Mowrey Julie, Jongens Thomas A., Nelson David L., Moses Kevin, and Warren Stephen T. , Nature neuroscience, 2004 Feb, Volume 7, Issue 2, p.113-7, (2004) Abstract
A physical map of the chicken genome., Wallis, John W., Aerts Jan, Groenen Martien A. M., Crooijmans Richard P. M. A., Layman Dan, Graves Tina A., Scheer Debra E., Kremitzki Colin, Fedele Mary J., Mudd Nancy K., et al. , Nature, 2004 Dec 9, Volume 432, Issue 7018, p.761-4, (2004) Abstract
Comparison of genome degradation in Paratyphi A and Typhi, human-restricted serovars of Salmonella enterica that cause typhoid., McClelland, Michael, Sanderson Kenneth E., Clifton Sandra W., Latreille Phil, Porwollik Steffen, Sabo Aniko, Meyer Rekha, Bieri Tamberlyn, Ozersky Phil, McLellan Michael, et al. , Nature genetics, 2004 Dec, Volume 36, Issue 12, p.1268-74, (2004) Abstract
EAnnot: a genome annotation tool using experimental evidence., Ding, Li, Sabo Aniko, Berkowicz Nicolas, Meyer Rekha R., Shotland Yoram, Johnson Mark R., Pepin Kymberlie H., Wilson Richard K., and Spieth John , Genome research, 2004 Dec, Volume 14, Issue 12, p.2503-9, (2004) Abstract
Variation in GRM3 affects cognition, prefrontal glutamate, and risk for schizophrenia., Egan, Michael F., Straub Richard E., Goldberg Terry E., Yakub Imtiaz, Callicott Joseph H., Hariri Ahmad R., Mattay Venkata S., Bertolino Alessandro, Hyde Thomas M., Shannon-Weickert Cynthia, et al. , Proceedings of the National Academy of Sciences of the United States of America, 2004 Aug 24, Volume 101, Issue 34, p.12604-9, (2004) Abstract
Imputing gene-treatment interactions when the genotype distribution is unknown using case-only and putative placebo analyses--a new method for the Genetics of Hypertension Associated Treatment (GenHAT) study., Davis, Barry R., Ford Charles E., Boerwinkle Eric, Arnett Donna, Eckfeldt John, and Black Henry , Statistics in medicine, 2004 Aug 15, Volume 23, Issue 15, p.2413-27, (2004) Abstract
Fosmid-based physical mapping of the Histoplasma capsulatum genome., Magrini, Vincent, Warren Wesley C., Wallis John, Goldman William E., Xu Jian, Mardis Elaine R., and McPherson John D. , Genome research, 2004 Aug, Volume 14, Issue 8, p.1603-9, (2004) Abstract
A bioinformatics analysis of memory consolidation reveals involvement of the transcription factor c-rel., Levenson, Jonathan M., Choi Sangdun, Lee Sun-Young, Cao Yun Anna, Ahn Hyung Jin, Worley Kim C., Pizzi Marina, Liou Hsiou-Chi, and Sweatt David J. , The Journal of neuroscience : the official journal of the Society for Neuroscience, 2004 Apr 21, Volume 24, Issue 16, p.3933-43, (2004) Abstract
Comparison of the genome of the oral pathogen Treponema denticola with other spirochete genomes., Seshadri, Rekha, Myers Garry S. A., Tettelin Hervé, Eisen Jonathan A., Heidelberg John F., Dodson Robert J., Davidsen Tanja M., DeBoy Robert T., Fouts Derrick E., Haft Dan H., et al. , Proceedings of the National Academy of Sciences of the United States of America, 2004 Apr 13, Volume 101, Issue 15, p.5646-51, (2004) Abstract
Genome sequence of the Brown Norway rat yields insights into mammalian evolution., Gibbs, Richard A., Weinstock George M., Metzker Michael L., Muzny Donna M., Sodergren Erica J., Scherer Steven, Scott Graham, Steffen David, Worley Kim C., Burch Paula E., et al. , Nature, 2004 Apr 1, Volume 428, Issue 6982, p.493-521, (2004) Abstract
The Atlas genome assembly system., Havlak, Paul, Chen Rui, Durbin James K., Egan Amy, Ren Yanru, Song Xing-Zhi, Weinstock George M., and Gibbs Richard A. , Genome research, 2004 Apr, Volume 14, Issue 4, p.721-32, (2004) Abstract
Diagnosis and treatment of levothyroxine pseudomalabsorption., Lips, D. J., van Reisen M. T., Voigt V., and Venekamp W. , The Netherlands journal of medicine, 2004 Apr, Volume 62, Issue 4, p.114-8, (2004) Abstract
Dynamic building of a BAC clone tiling path for the Rat Genome Sequencing Project., Chen, Rui, Sodergren Erica, Weinstock George M., and Gibbs Richard A. , Genome research, 2004 Apr, Volume 14, Issue 4, p.679-84, (2004) Abstract
Genomic analysis of the nuclear receptor family: new insights into structure, regulation, and evolution from the rat genome., Zhang, Zhengdong, Burch Paula E., Cooney Austin J., Lanz Rainer B., Pereira Fred A., Wu Jiaqian, Gibbs Richard A., Weinstock George, and Wheeler David A. , Genome research, 2004 Apr, Volume 14, Issue 4, p.580-90, (2004) Abstract
Identification of rat genes by TWINSCAN gene prediction, RT-PCR, and direct sequencing., Wu, Jiaqian, Shteynberg David, Arumugam Manimozhiyan, Gibbs Richard A., and Brent Michael R. , Genome research, 2004 Apr, Volume 14, Issue 4, p.665-71, (2004) Abstract
Identification of rat genes by TWINSCAN gene prediction, RT-PCR, and direct sequencing., Wu, Jiaqian, Shteynberg David, Arumugam Manimozhiyan, Gibbs Richard A., and Brent Michael R. , Genome research, 2004 Apr, Volume 14, Issue 4, p.665-71, (2004) Abstract
Integrated and sequence-ordered BAC- and YAC-based physical maps for the rat genome., Krzywinski, Martin, Wallis John, Gösele Claudia, Bosdet Ian, Chiu Readman, Graves Tina, Hummel Oliver, Layman Dan, Mathewson Carrie, Wye Natasja, et al. , Genome research, 2004 Apr, Volume 14, Issue 4, p.766-79, (2004) Abstract
Large-scale RT-PCR recovery of full-length cDNA clones., Wu, Jiaqian, Garcia Angela M., Hulyk Steven, Sneed Anna, Kowis Carla, Yuan Ye, Steffen David, McPherson John D., Gunaratne Preethi H., and Gibbs Richard A. , BioTechniques, 2004 Apr, Volume 36, Issue 4, p.690-6, 698-700, (2004) Abstract
Pash: efficient genome-scale sequence anchoring by Positional Hashing., Kalafus, Ken J., Jackson Andrew R., and Milosavljevic Aleksandar , Genome research, 2004 Apr, Volume 14, Issue 4, p.672-8, (2004) Abstract
Construction of small genome BAC library for functional and genomic applications., Smajs, David, Norris Steven J., and Weinstock George M. , Methods in molecular biology (Clifton, N.J.), 2004, Volume 255, p.47-56, (2004)
Genome-wide linkage disequilibrium and haplotype maps., Belmont, John W., and Gibbs Richard A. , American journal of pharmacogenomics : genomics-related research in drug development and clinical practice, 2004, Volume 4, Issue 4, p.253-62, (2004) Abstract


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