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Publications

2004
Identification of rat genes by TWINSCAN gene prediction, RT-PCR, and direct sequencing., Wu, Jiaqian, Shteynberg David, Arumugam Manimozhiyan, Gibbs Richard A., and Brent Michael R. , Genome research, 2004 Apr, Volume 14, Issue 4, p.665-71, (2004) Abstract
Integrated and sequence-ordered BAC- and YAC-based physical maps for the rat genome., Krzywinski, Martin, Wallis John, Gösele Claudia, Bosdet Ian, Chiu Readman, Graves Tina, Hummel Oliver, Layman Dan, Mathewson Carrie, Wye Natasja, et al. , Genome research, 2004 Apr, Volume 14, Issue 4, p.766-79, (2004) Abstract
Large-scale RT-PCR recovery of full-length cDNA clones., Wu, Jiaqian, Garcia Angela M., Hulyk Steven, Sneed Anna, Kowis Carla, Yuan Ye, Steffen David, McPherson John D., Gunaratne Preethi H., and Gibbs Richard A. , BioTechniques, 2004 Apr, Volume 36, Issue 4, p.690-6, 698-700, (2004) Abstract
Pash: efficient genome-scale sequence anchoring by Positional Hashing., Kalafus, Ken J., Jackson Andrew R., and Milosavljevic Aleksandar , Genome research, 2004 Apr, Volume 14, Issue 4, p.672-8, (2004) Abstract
Construction of small genome BAC library for functional and genomic applications., Smajs, David, Norris Steven J., and Weinstock George M. , Methods in molecular biology (Clifton, N.J.), 2004, Volume 255, p.47-56, (2004)
Genome-wide linkage disequilibrium and haplotype maps., Belmont, John W., and Gibbs Richard A. , American journal of pharmacogenomics : genomics-related research in drug development and clinical practice, 2004, Volume 4, Issue 4, p.253-62, (2004) Abstract
Pooled Genomic Indexing (PGI): analysis and design of experiments., Csurös, Miklós, and Milosavljevic Aleksandar , Journal of computational biology : a journal of computational molecular cell biology, 2004, Volume 11, Issue 5, p.1001-21, (2004) Abstract
Preparation of BAC libraries from bacterial genomes by in vitro packaging., Pal, Sangita, Mak Solida, and Weinstock George M. , Methods in molecular biology (Clifton, N.J.), 2004, Volume 255, p.57-68, (2004)
2003
Gene expression profiling and functional proteomic analysis reveal perturbed kinase-mediated signaling in genetic stroke susceptibility., Fornage, Myriam, Swank Michael W., Boerwinkle Eric, and Doris Peter A. , Physiological genomics, 2003 Sep 29, Volume 15, Issue 1, p.75-83, (2003) Abstract
An Enterococcus faecium secreted antigen, SagA, exhibits broad-spectrum binding to extracellular matrix proteins and appears essential for E. faecium growth., Teng, Fang, Kawalec Magdalena, Weinstock George M., Hryniewicz Waleria, and Murray Barbara E. , Infection and immunity, 2003 Sep, Volume 71, Issue 9, p.5033-41, (2003) Abstract
Novel potential ALL low-risk markers revealed by gene expression profiling with new high-throughput SSH-CCS-PCR., Qiu, J., Gunaratne P., Peterson L. E., Khurana D., Walsham N., Loulseged H., Karni R. J., Roussel E., Gibbs R. A., Margolin J. F., et al. , Leukemia, 2003 Sep, Volume 17, Issue 9, p.1891-900, (2003) Abstract
Using a pericentromeric interspersed repeat to recapitulate the phylogeny and expansion of human centromeric segmental duplications., Horvath, J. E., Gulden C. L., Bailey J. A., Yohn C., McPherson J. D., Prescott A., Roe B. A., de Jong P. J., Ventura M., Misceo D., et al. , Molecular biology and evolution, 2003 Sep, Volume 20, Issue 9, p.1463-79, (2003) Abstract
Concatenation cDNA sequencing for transcriptome analysis., Gunaratne, Preethi H., Wu Jiaqian, Garcia Angela M., Hulyk Steven, Worley Kim C., Margolin Judith F., and Gibbs Richard A. , Comptes rendus biologies, 2003 Oct-Nov, Volume 326, Issue 10-11, p.971-7, (2003) Abstract
From vulnerable plaque to vulnerable patient: a call for new definitions and risk assessment strategies: Part I., Naghavi, Morteza, Libby Peter, Falk Erling, Casscells Ward S., Litovsky Silvio, Rumberger John, Badimon Juan Jose, Stefanadis Christodoulos, Moreno Pedro, Pasterkamp Gerard, et al. , Circulation, 2003 Oct 7, Volume 108, Issue 14, p.1664-72, (2003) Abstract
Rigid, conjugated, fluoresceinated thymidine triphosphates: syntheses and polymerase mediated incorporation into DNA analogues., Thoresen, Lars H., Jiao Guan-Sheng, Haaland Wade C., Metzker Michael L., and Burgess Kevin , Chemistry (Weinheim an der Bergstrasse, Germany), 2003 Oct 6, Volume 9, Issue 19, p.4603-10, (2003) Abstract
Positional cloning of the major quantitative trait locus underlying lung tumor susceptibility in mice., Zhang, Zhongqiu, Futamura Manabu, Vikis Haris G., Wang Min, Li Jie, Wang Yian, Guan Kun-Liang, and You Ming , Proceedings of the National Academy of Sciences of the United States of America, 2003 Oct 28, Volume 100, Issue 22, p.12642-7, (2003) Abstract
From vulnerable plaque to vulnerable patient: a call for new definitions and risk assessment strategies: Part II., Naghavi, Morteza, Libby Peter, Falk Erling, Casscells Ward S., Litovsky Silvio, Rumberger John, Badimon Juan Jose, Stefanadis Christodoulos, Moreno Pedro, Pasterkamp Gerard, et al. , Circulation, 2003 Oct 14, Volume 108, Issue 15, p.1772-8, (2003) Abstract
Graded phenotypic response to partial and complete deficiency of a brain-specific transcript variant of the winged helix transcription factor RFX4., Blackshear, Perry J., Graves Joan P., Stumpo Deborah J., Cobos Inma, Rubenstein John L. R., and Zeldin Darryl C. , Development (Cambridge, England), 2003 Oct, Volume 130, Issue 19, p.4539-52, (2003) Abstract
Dissection of K+ currents in Caenorhabditis elegans muscle cells by genetics and RNA interference., Santi, C. M., Yuan A., Fawcett G., Wang Z. - W., Butler A., Nonet M. L., Wei A., Rojas P., and Salkoff L. , Proceedings of the National Academy of Sciences of the United States of America, 2003 Nov 25, Volume 100, Issue 24, p.14391-6, (2003) Abstract
Association of the T-cell regulatory gene CTLA4 with susceptibility to autoimmune disease., Ueda, Hironori, Howson Joanna M. M., Esposito Laura, Heward Joanne, Snook Hywel, Chamberlain Giselle, Rainbow Daniel B., Hunter Kara M. D., Smith Annabel N., Di Genova Gianfranco, et al. , Nature, 2003 May 29, Volume 423, Issue 6939, p.506-11, (2003) Abstract
Haplotype block linkage disequilibrium mapping., Xiong, Momiao, Zhao Jinying, and Boerwinkle Eric , Frontiers in bioscience : a journal and virtual library, 2003 May 1, Volume 8, p.a85-93, (2003) Abstract
Sequence and structure of the extrachromosomal palindrome encoding the ribosomal RNA genes in Dictyostelium., Sucgang, Richard, Chen Guokai, Liu Wen, Lindsay Ryan, Lu Jing, Muzny Donna, Shaulsky Gad, Loomis William, Gibbs Richard, and Kuspa Adam , Nucleic acids research, 2003 May 1, Volume 31, Issue 9, p.2361-8, (2003) Abstract
Evaluating the context-dependent effect of family history of stroke in a genome scan for hypertension., Morrison, Alanna C., Brown Andrew, Kardia Sharon L. R., Turner Stephen T., and Boerwinkle Eric , Stroke; a journal of cerebral circulation, 2003 May, Volume 34, Issue 5, p.1170-5, (2003) Abstract
Haplotype structure, LD blocks, and uneven recombination within the LRP5 gene., Twells, Rebecca C. J., Mein Charles A., Phillips Michael S., Hess Fred J., Veijola Riitta, Gilbey Matthew, Bright Matthew, Metzker Michael, Lie Benedicte A., Kingsnorth Amanda, et al. , Genome research, 2003 May, Volume 13, Issue 5, p.845-55, (2003) Abstract
Polymorphisms at the G72/G30 gene locus, on 13q33, are associated with bipolar disorder in two independent pedigree series., Hattori, Eiji, Liu Chunyu, Badner Judith A., Bonner Tom I., Christian Susan L., Maheshwari Manjula, Detera-Wadleigh Sevilla D., Gibbs Richard A., and Gershon Elliot S. , American journal of human genetics, 2003 May, Volume 72, Issue 5, p.1131-40, (2003) Abstract


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