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Publications

2002
Evolutionary traces of functional surfaces along G protein signaling pathway., Lichtarge, Olivier, Sowa Mathew E., and Philippi Anne , Methods in enzymology, 2002, Volume 344, p.536-56, (2002)
Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence., Celniker, Susan E., Wheeler David A., Kronmiller Brent, Carlson Joseph W., Halpern Aaron, Patel Sandeep, Adams Mark, Champe Mark, Dugan Shannon P., Frise Erwin, et al. , Genome biology, 2002, Volume 3, Issue 12, p.RESEARCH0079, (2002) Abstract
2001
A simple model host for identifying Gram-positive virulence factors., Garsin, D. A., Sifri C. D., Mylonakis E., Qin X., Singh K. V., Murray B. E., Calderwood S. B., and Ausubel F. M. , Proceedings of the National Academy of Sciences of the United States of America, 2001 Sep 11, Volume 98, Issue 19, p.10892-7, (2001) Abstract
DNA binding and modulation of gene expression by the latency-associated nuclear antigen of Kaposi's sarcoma-associated herpesvirus., Garber, A. C., Shu M. A., Hu J., and Renne R. , Journal of virology, 2001 Sep, Volume 75, Issue 17, p.7882-92, (2001) Abstract
An evaluation of the draft human genome sequence., Katsanis, N., Worley K. C., and Lupski J. R. , Nature genetics, 2001 Sep, Volume 29, Issue 1, p.88-91, (2001) Abstract
A clone-array pooled shotgun strategy for sequencing large genomes., Cai, W. W., Chen R., Gibbs R. A., and Bradley A. , Genome research, 2001 Oct, Volume 11, Issue 10, p.1619-23, (2001) Abstract
Characterization of the rat GRIK5 kainate receptor subunit gene promoter and its intragenic regions involved in neural cell specificity., Chew, L. J., Yuan X., Scherer S. E., Qie L., Huang F., Hayes W. P., and Gallo V. , The Journal of biological chemistry, 2001 Nov 9, Volume 276, Issue 45, p.42162-71, (2001) Abstract
Comparing vertebrate whole-genome shotgun reads to the human genome., Chen, R., Bouck J. B., Weinstock G. M., and Gibbs R. A. , Genome research, 2001 Nov, Volume 11, Issue 11, p.1807-16, (2001) Abstract
Characterization of fsr, a regulator controlling expression of gelatinase and serine protease in Enterococcus faecalis OG1RF., Qin, X., Singh K. V., Weinstock G. M., and Murray B. E. , Journal of bacteriology, 2001 Jun, Volume 183, Issue 11, p.3372-82, (2001) Abstract
Mapping and genome sequence analysis of chromosome 5 regions involved in bladder cancer progression., Kram, A., Li L., Zhang R. D., Yoon D. S., Ro J. Y., Johnston D., Grossman H. B., Scherer S., and Czerniak B. , Laboratory investigation; a journal of technical methods and pathology, 2001 Jul, Volume 81, Issue 7, p.1039-48, (2001) Abstract
A high-resolution map of human chromosome 12., Montgomery, K. T., Lee E., Miller A., Lau S., Shim C., Decker J., Chiu D., Emerling S., Sekhon M., Kim R., et al. , Nature, 2001 Feb 15, Volume 409, Issue 6822, p.945-6, (2001) Abstract
Initial sequencing and analysis of the human genome., Lander, E. S., Linton L. M., Birren B., Nusbaum C., Zody M. C., Baldwin J., Devon K., Dewar K., Doyle M., FitzHugh W., et al. , Nature, 2001 Feb 15, Volume 409, Issue 6822, p.860-921, (2001) Abstract
A physical map of the human genome., McPherson, J. D., Marra M., Hillier L., Waterston R. H., Chinwalla A., Wallis J., Sekhon M., Wylie K., Mardis E. R., Wilson R. K., et al. , Nature, 2001 Feb 15, Volume 409, Issue 6822, p.934-41, (2001) Abstract
Genetic mapping and DNA sequence-based analysis of deleted regions on chromosome 16 involved in progression of bladder cancer from occult preneoplastic conditions to invasive disease., Yoon, D. S., Li L., Zhang R. D., Kram A., Ro J. Y., Johnston D., Grossman H. B., Scherer S., and Czerniak B. , Oncogene, 2001 Aug 16, Volume 20, Issue 36, p.5005-14, (2001) Abstract
CFFM4: a new member of the CD20/FcepsilonRIbeta family., Gingras, M. C., Lapillonne H., and Margolin J. F. , Immunogenetics, 2001 Aug, Volume 53, Issue 6, p.468-76, (2001) Abstract
Characterization of cryptic flagellin genes in Shigella boydii and Shigella dysenteriae., Tominaga, A., Mahmoud M. A., Al Mamun A. A., and Mukaihara T. , Genes & genetic systems, 2001 Apr, Volume 76, Issue 2, p.111-20, (2001) Abstract
Evolution tunes the excitability of individual neurons., Salkoff, L., Butler A., Fawcett G., Kunkel M., McArdle C., Paz-y-Mino G., Nonet M., Walton N., Wang Z. W., Yuan A., et al. , Neuroscience, 2001, Volume 103, Issue 4, p.853-9, (2001) Abstract
2000
Enterococcus faecalis adhesin, ace, mediates attachment to extracellular matrix proteins collagen type IV and laminin as well as collagen type I., Nallapareddy, S. R., Qin X., Weinstock G. M., Höök M., and Murray B. E. , Infection and immunity, 2000 Sep, Volume 68, Issue 9, p.5218-24, (2000) Abstract
Enterococcus faecalis adhesin, ace, mediates attachment to extracellular matrix proteins collagen type IV and laminin as well as collagen type I., Nallapareddy, S. R., Qin X., Weinstock G. M., Höök M., and Murray B. E. , Infection and immunity, 2000 Sep, Volume 68, Issue 9, p.5218-24, (2000) Abstract
The Escherichia coli UVM response is accompanied by an SOS-independent error-prone DNA replication activity demonstrable in vitro., Al Mamun, A. A., Yadava R. S., Ren L., and Humayun M. Z. , Molecular microbiology, 2000 Oct, Volume 38, Issue 2, p.368-80, (2000) Abstract
Large expansion of the ATTCT pentanucleotide repeat in spinocerebellar ataxia type 10., Matsuura, T., Yamagata T., Burgess D. L., Rasmussen A., Grewal R. P., Watase K., Khajavi M., McCall A. E., Davis Caleb F., Zu L., et al. , Nature genetics, 2000 Oct, Volume 26, Issue 2, p.191-4, (2000) Abstract
Effects of Enterococcus faecalis fsr genes on production of gelatinase and a serine protease and virulence., Qin, X., Singh K. V., Weinstock G. M., and Murray B. E. , Infection and immunity, 2000 May, Volume 68, Issue 5, p.2579-86, (2000) Abstract
Effects of Enterococcus faecalis fsr genes on production of gelatinase and a serine protease and virulence., Qin, X., Singh K. V., Weinstock G. M., and Murray B. E. , Infection and immunity, 2000 May, Volume 68, Issue 5, p.2579-86, (2000) Abstract
Shotgun sample sequence comparisons between mouse and human genomes., Bouck, J. B., Metzker M. L., and Gibbs R. A. , Nature genetics, 2000 May, Volume 25, Issue 1, p.31-3, (2000) Abstract
A BAC-based physical map of the major autosomes of Drosophila melanogaster., Hoskins, R. A., Nelson C. R., Berman B. P., Laverty T. R., George R. A., Ciesiolka L., Naeemuddin M., Arenson A. D., Durbin J., David R. G., et al. , Science (New York, N.Y.), 2000 Mar 24, Volume 287, Issue 5461, p.2271-4, (2000) Abstract


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