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Publications

Journal Article
A "double adaptor" method for improved shotgun library construction., Andersson, B., Wentland M. A., Ricafrente J. Y., Liu W., and Gibbs R. A. , Analytical biochemistry, 1996 Apr 5, Volume 236, Issue 1, p.107-13, (1996) Abstract
The 1000 Genomes Project: data management and community access., Clarke, Laura, Zheng-Bradley Xiangqun, Smith Richard, Kulesha Eugene, Xiao Chunlin, Toneva Iliana, Vaughan Brendan, Preuss Don, Leinonen Rasko, Shumway Martin, et al. , Nature methods, 2012 May, Volume 9, Issue 5, p.459-62, (2012) Abstract
130 kb of DNA sequence reveals two new genes and a regional duplication distal to the human iduronate-2-sulfate sulfatase locus., Timms, K. M., Lu F., Shen Y., Pierson C. A., Muzny D. M., Gu Y., Nelson D. L., and Gibbs R. A. , Genome research, 1995 Aug, Volume 5, Issue 1, p.71-8, (1995) Abstract
16S gut community of the Cameron County Hispanic Cohort., Ross, Matthew C., Muzny Donna M., McCormick Joseph B., Gibbs Richard A., Fisher-Hoch Susan P., and Petrosino Joseph F. , Microbiome, 2015, Volume 3, p.7, (2015) Abstract
28-way vertebrate alignment and conservation track in the UCSC Genome Browser., Miller, Webb, Rosenbloom Kate, Hardison Ross C., Hou Minmei, Taylor James, Raney Brian, Burhans Richard, King David C., Baertsch Robert, Blankenberg Daniel, et al. , Genome research, 2007 Dec, Volume 17, Issue 12, p.1797-808, (2007) Abstract
The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer., Pomerantz, Mark M., Ahmadiyeh Nasim, Jia Li, Herman Paula, Verzi Michael P., Doddapaneni Harshavardhan, Beckwith Christine A., Chan Jennifer A., Hills Adam, Davis Matt, et al. , Nature genetics, 2009 Aug, Volume 41, Issue 8, p.882-4, (2009) Abstract
A-beta-subtype of ketosis-prone diabetes is not predominantly a monogenic diabetic syndrome., Haaland, Wade C., Scaduto Diane I., Maldonado Mario R., Mansouri Dena L., Nalini Ramaswami, Iyer Dinakar, Patel Sanjeet, Guthikonda Anu, Hampe Christiane S., Balasubramanyam Ashok, et al. , Diabetes care, 2009 May, Volume 32, Issue 5, p.873-7, (2009) Abstract
ABCF1 extrinsically regulates retinal pigment epithelial cell phagocytosis., Guo, Feiye, Ding Ying, Caberoy Nora, Alvarado Gabriela, Wang Feng, Chen Rui, and Li Wei , Molecular biology of the cell, 2015 Apr 22, (2015) Abstract
Aberrant TGF-beta production and regulation in metastatic malignancy., Schwarz, L. C., Wright J. A., Gingras M. C., Kondaiah P., Danielpour D., Pimentel M., Sporn M. B., and Greenberg A. H. , Growth factors (Chur, Switzerland), 1990, Volume 3, Issue 2, p.115-27, (1990) Abstract
Absence of an interaction between the angiotensin-converting enzyme insertion-deletion polymorphism and pravastatin on cardiovascular disease in high-risk hypertensive patients: the Genetics of Hypertension-Associated Treatment (GenHAT) study., Maitland-van der Zee, Anke-Hilse, Boerwinkle Eric, Arnett Donna K., Davis Barry R., Leiendecker-Foster Catherine, Miller Michael B., Klungel Olaf H., Ford Charles E., and Eckfeldt John H. , American heart journal, 2007 Jan, Volume 153, Issue 1, p.54-8, (2007) Abstract
Accurate determination of DNA in agarose gels using the novel algorithm GelScann(1.0)., Metzker, M. L., Allain K. M., and Gibbs R. A. , Computer applications in the biosciences : CABIOS, 1995 Apr, Volume 11, Issue 2, p.187-94, (1995) Abstract
Acquisition of uncharacterized sequences from Candidatus liberibacter, an unculturable bacterium, using an improved genomic walking method., Lin, Hong, Doddapaneni Harshavardhan, Bai Xianjing, Yao Jiqiang, Zhao Xiaolong, and Civerolo Edwin L. , Molecular and cellular probes, 2008 Feb, Volume 22, Issue 1, p.30-7, (2008) Abstract
Activation of multiple proto-oncogenic tyrosine kinases in breast cancer via loss of the PTPN12 phosphatase., Sun, Tingting, Aceto Nicola, Meerbrey Kristen L., Kessler Jessica D., Zhou Chunshui, Migliaccio Ilenia, Nguyen Don X., Pavlova Natalya N., Botero Maria, Huang Jian, et al. , Cell, 2011 Mar 4, Volume 144, Issue 5, p.703-18, (2011) Abstract
Adaptor-based uracil DNA glycosylase cloning simplifies shotgun library construction for large-scale sequencing., Andersson, B., Povinelli C. M., Wentland M. A., Shen Y., Muzny D. M., and Gibbs R. A. , Analytical biochemistry, 1994 May 1, Volume 218, Issue 2, p.300-8, (1994) Abstract
ADD1 460W allele associated with cardiovascular disease in hypertensive individuals., Morrison, Alanna C., Bray Molly S., Folsom Aaron R., and Boerwinkle Eric , Hypertension, 2002 Jun, Volume 39, Issue 6, p.1053-7, (2002) Abstract
Adult presentation of X-linked Conradi-Hünermann-Happle syndrome., Posey, Jennifer E., Burrage Lindsay C., Campeau Philippe M., Lu James T., Eble Tanya N., Kratz Lisa, Schlesinger Alan E., Gibbs Richard A., Lee Brendan H., and Nagamani Sandesh C. S. , American journal of medical genetics. Part A, 2015 Apr 2, (2015) Abstract
Advances in genome biology and technology., Gunaratne, Preethi H. , Expert review of molecular diagnostics, 2004 Nov, Volume 4, Issue 6, p.757-60, (2004)
Advances in translational bioinformatics facilitate revealing the landscape of complex disease mechanisms., Yang, Jack Y., Dunker A., Liu Jun S., Qin Xiang, Arabnia Hamid R., Yang William, Niemierko Andrzej, Chen Zhongxue, Luo Zuojie, Wang Liangjiang, et al. , BMC bioinformatics, 2014, Volume 15 Suppl 17, p.I1, (2014) Abstract
Adverse outcomes in clear cell renal cell carcinoma with mutations of 3p21 epigenetic regulators BAP1 and SETD2: a report by MSKCC and the KIRC TCGA research network., Hakimi, Ari A., Ostrovnaya Irina, Reva Boris, Schultz Nikolaus, Chen Ying-Bei, Gonen Mithat, Liu Han, Takeda Shugaku, Voss Martin H., Tickoo Satish K., et al. , Clinical cancer research : an official journal of the American Association for Cancer Research, 2013 Jun 15, Volume 19, Issue 12, p.3259-67, (2013) Abstract
Ago HITS-CLIP expands understanding of Kaposi's sarcoma-associated herpesvirus miRNA function in primary effusion lymphomas., Haecker, Irina, Gay Lauren A., Yang Yajie, Hu Jianhong, Morse Alison M., McIntyre Lauren M., and Renne Rolf , PLoS pathogens, 2012, Volume 8, Issue 8, p.e1002884, (2012) Abstract
An allylic/acyclic adenosine nucleoside triphosphate for termination of DNA synthesis by DNA template-dependent polymerases., Martinez, C. I., Thoresen L. H., Gibbs R. A., and Burgess K. , Nucleic acids research, 1999 Mar 1, Volume 27, Issue 5, p.1271-4, (1999) Abstract
The alpha-amino-3-hydroxyl-5-methyl-4-isoxazolepropionate receptor trafficking regulator "stargazin" is related to the claudin family of proteins by Its ability to mediate cell-cell adhesion., Price, Maureen G., Davis Caleb F., Deng Fang, and Burgess Daniel L. , The Journal of biological chemistry, 2005 May 20, Volume 280, Issue 20, p.19711-20, (2005) Abstract
Alu-primed polymerase chain reaction for regional assignment of 110 yeast artificial chromosome clones from the human X chromosome: identification of clones associated with a disease locus., Nelson, D. L., Ballabio A., Victoria M. F., Pieretti M., Bies R. D., Gibbs R. A., Maley J. A., Chinault A. C., Webster T. D., and Caskey C. T. , Proceedings of the National Academy of Sciences of the United States of America, 1991 Jul 15, Volume 88, Issue 14, p.6157-61, (1991) Abstract
AluY insertion (IVS4-52ins316alu) in the glycerol kinase gene from an individual with benign glycerol kinase deficiency., Zhang, Y., Dipple K. M., Vilain E., Huang B. L., Finlayson G., Therrell B. L., Worley K., Deininger P., and McCabe E. R. , Human mutation, 2000, Volume 15, Issue 4, p.316-23, (2000) Abstract
Amygdalar and hippocampal substrates of anxious temperament differ in their heritability., Oler, Jonathan A., Fox Andrew S., Shelton Steven E., Rogers Jeffrey, Dyer Thomas D., Davidson Richard J., Shelledy Wendy, Oakes Terrence R., Blangero John, and Kalin Ned H. , Nature, 2010 Aug 12, Volume 466, Issue 7308, p.864-8, (2010) Abstract


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