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Harsha Doddapaneni, Ph.D.

Assistant Professor, Department of Molecular and Human Genetics

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Cyanophora paradoxa genome elucidates origin of photosynthesis in algae and plants., Price, Dana C., Chan Cheong Xin, Yoon Hwan Su, Yang Eun Chan, Qiu Huan, Weber Andreas P. M., Schwacke Rainer, Gross Jeferson, Blouin Nicolas A., Lane Chris, et al. , Science (New York, N.Y.), 2012 Feb 17, Volume 335, Issue 6070, p.843-7, (2012) Abstract
Identification of a single-stranded DNA virus associated with citrus chlorotic dwarf disease, a new member in the family Geminiviridae., Loconsole, Giuliana, Saldarelli Pasquale, Doddapaneni Harshavardhan, Savino Vito, Martelli Giovanni P., and Saponari Maria , Virology, 2012 Oct 10, Volume 432, Issue 1, p.162-72, (2012) Abstract
Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche., Morin, Emmanuelle, Kohler Annegret, Baker Adam R., Foulongne-Oriol Marie, Lombard Vincent, Nagy Laszlo G., Ohm Robin A., Patyshakuliyeva Aleksandrina, Brun Annick, Aerts Andrea L., et al. , Proceedings of the National Academy of Sciences of the United States of America, 2012 Oct 23, Volume 109, Issue 43, p.17501-6, (2012) Abstract
The complete genome sequence of 'Candidatus Liberibacter solanacearum', the bacterium associated with potato zebra chip disease., Lin, Hong, Lou Binghai, Glynn Jonathan M., Doddapaneni Harshavardhan, Civerolo Edwin L., Chen Chuanwu, Duan Yongping, Zhou Lijuan, and Vahling Cheryl M. , PloS one, 2011, Volume 6, Issue 4, p.e19135, (2011) Abstract
A new diagnostic system for ultra-sensitive and specific detection and quantification of Candidatus Liberibacter asiaticus, the bacterium associated with citrus Huanglongbing., Lin, Hong, Chen Chuanwu, Doddapaneni Harshavardhan, Duan Yongping, Civerolo Edwin L., Bai Xianjin, and Zhao Xiaolong , Journal of microbiological methods, 2010 Apr, Volume 81, Issue 1, p.17-25, (2010) Abstract
P450 redox enzymes in the white rot fungus Phanerochaete chrysosporium: gene transcription, heterologous expression, and activity analysis on the purified proteins., Subramanian, Venkataramanan, Doddapaneni Harshavardhan, Syed Khajamohiddin, and Yadav Jagjit S. , Current microbiology, 2010 Oct, Volume 61, Issue 4, p.306-14, (2010) Abstract
Genome-to-function characterization of novel fungal P450 monooxygenases oxidizing polycyclic aromatic hydrocarbons (PAHs)., Syed, Khajamohiddin, Doddapaneni Harshavardhan, Subramanian Venkataramanan, Lam Ying Wai, and Yadav Jagjit S. , Biochemical and biophysical research communications, 2010 Sep 3, Volume 399, Issue 4, p.492-7, (2010) Abstract
Complete genome sequence of citrus huanglongbing bacterium, 'Candidatus Liberibacter asiaticus' obtained through metagenomics., Duan, Yongping, Zhou Lijuan, Hall David G., Li Wenbin, Doddapaneni Harshavardhan, Lin Hong, Liu Li, Vahling Cheryl M., Gabriel Dean W., Williams Kelly P., et al. , Molecular plant-microbe interactions : MPMI, 2009 Aug, Volume 22, Issue 8, p.1011-20, (2009) Abstract
The 8q24 cancer risk variant rs6983267 shows long-range interaction with MYC in colorectal cancer., Pomerantz, Mark M., Ahmadiyeh Nasim, Jia Li, Herman Paula, Verzi Michael P., Doddapaneni Harshavardhan, Beckwith Christine A., Chan Jennifer A., Hills Adam, Davis Matt, et al. , Nature genetics, 2009 Aug, Volume 41, Issue 8, p.882-4, (2009) Abstract
Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion., Martinez, Diego, Challacombe Jean, Morgenstern Ingo, Hibbett David, Schmoll Monika, Kubicek Christian P., Ferreira Patricia, Ruiz-Duenas Francisco J., Martinez Angel T., Kersten Phil, et al. , Proceedings of the National Academy of Sciences of the United States of America, 2009 Feb 10, Volume 106, Issue 6, p.1954-9, (2009) Abstract
Comparative phylogenomics and multi-gene cluster analyses of the Citrus Huanglongbing (HLB)-associated bacterium Candidatus Liberibacter., Doddapaneni, Harshavardhan, Liao Huihong, Lin Hong, Bai Xianjin, Zhao Xiaolong, Civerolo Edwin L., Irey Michael, Coletta-Filho Helvecio, and Pietersen Gerhard , BMC research notes, 2008, Volume 1, p.72, (2008) Abstract
PrimerSNP: a web tool for whole-genome selection of allele-specific and common primers of phylogenetically-related bacterial genomic sequences., Yao, Jiqiang, Lin Hong, Van Deynze Allen, Doddapaneni Harshavardhan, Francis Martha, Lemos Eliana Gertrudes Macedo, and Civerolo Edwin L. , BMC microbiology, 2008, Volume 8, p.185, (2008) Abstract
VitisExpDB: a database resource for grape functional genomics., Doddapaneni, Harshavardhan, Lin Hong, Walker Andrew M., Yao Jiqiang, and Civerolo Edwin L. , BMC plant biology, 2008, Volume 8, p.23, (2008) Abstract
Acquisition of uncharacterized sequences from Candidatus liberibacter, an unculturable bacterium, using an improved genomic walking method., Lin, Hong, Doddapaneni Harshavardhan, Bai Xianjing, Yao Jiqiang, Zhao Xiaolong, and Civerolo Edwin L. , Molecular and cellular probes, 2008 Feb, Volume 22, Issue 1, p.30-7, (2008) Abstract
nWayComp: a genome-wide sequence comparison tool for multiple strains/species of phylogenetically related microorganisms., Yao, Jiqiang, Lin Hong, Doddapaneni Harshavardhan, and Civerolo Edwin L. , In silico biology, 2007, Volume 7, Issue 2, p.195-200, (2007) Abstract
Comparative analysis of ESTs involved in grape responses to Xylella fastidiosa infection., Lin, Hong, Doddapaneni Harshavardhan, Takahashi Yuri, and Walker Andrew M. , BMC plant biology, 2007, Volume 7, p.8, (2007) Abstract
Expression of a beta-glucosidase gene results in increased accumulation of salicylic acid in transgenic Nicotiana tabacum cv. Xanthi-nc NN genotype., Yao, Jiqiang, Huot Bethany, Foune Catherine, Doddapaneni Harshavardhan, and Enyedi Alexander , Plant cell reports, 2007 Mar, Volume 26, Issue 3, p.291-301, (2007) Abstract
Analysis of the genome-wide variations among multiple strains of the plant pathogenic bacterium Xylella fastidiosa., Doddapaneni, Harshavardhan, Yao Jiqiang, Lin Hong, Walker Andrew M., and Civerolo Edwin L. , BMC genomics, 2006, Volume 7, p.225, (2006) Abstract
P450ome of the white rot fungus Phanerochaete chrysosporium: structure, evolution and regulation of expression of genomic P450 clusters., Yadav, J. S., Doddapaneni H., and Subramanian V. , Biochemical Society transactions, 2006 Dec, Volume 34, Issue Pt 6, p.1165-9, (2006) Abstract
Differential regulation and xenobiotic induction of tandem P450 monooxygenase genes pc-1 (CYP63A1) and pc-2 (CYP63A2) in the white-rot fungus Phanerochaete chrysosporium., Doddapaneni, Harshavardhan, and Yadav Jagjit S. , Applied microbiology and biotechnology, 2004 Oct, Volume 65, Issue 5, p.559-65, (2004) Abstract

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