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Yi Han, Ph.D.

Assistant Professor, Department of Molecular and Human Genetics

image: Yi Han, Ph.D.Contact Information

yhan@bcm.edu

 

 

 

 

 

 

Publications

PacBio-LITS: a large-insert targeted sequencing method for characterization of human disease-associated chromosomal structural variations., Wang, Min, Beck Christine R., English Adam C., Meng Qingchang, Buhay Christian, Han Yi, Doddapaneni Harsha V., Yu Fuli, Boerwinkle Eric, Lupski James R., et al. , BMC genomics, 2015, Volume 16, Issue 1, p.214, (2015) Abstract
Lucilia cuprina genome unlocks parasitic fly biology to underpin future interventions., Anstead, Clare A., Korhonen Pasi K., Young Neil D., Hall Ross S., Jex Aaron R., Murali Shwetha C., Hughes Daniel S. T., Lee Siu F., Perry Trent, Stroehlein Andreas J., et al. , Nature communications, 2015, Volume 6, p.7344, (2015) Abstract
Assessing structural variation in a personal genome-towards a human reference diploid genome., English, Adam C., Salerno William J., Hampton Oliver A., Gonzaga-Jauregui Claudia, Ambreth Shruthi, Ritter Deborah I., Beck Christine R., Davis Caleb F., Dahdouli Mahmoud, Ma Singer, et al. , BMC genomics, 2015 Apr 11, Volume 16, Issue 1, p.286, (2015) Abstract
Genomic Signatures of Cooperation and Conflict in the Social Amoeba., Ostrowski, Elizabeth A., Shen Yufeng, Tian Xiangjun, Sucgang Richard, Jiang Huaiyang, Qu Jiaxin, Katoh-Kurasawa Mariko, Brock Debra A., Dinh Christopher, Lara-Garduno Fremiet, et al. , Current biology : CB, 2015 Jun 15, Volume 25, Issue 12, p.1661-5, (2015) Abstract
A Massive Expansion of Effector Genes Underlies Gall-Formation in the Wheat Pest Mayetiola destructor., Zhao, Chaoyang, Escalante Lucio Navarro, Chen Hang, Benatti Thiago R., Qu Jiaxin, Chellapilla Sanjay, Waterhouse Robert M., Wheeler David, Andersson Martin N., Bao Riyue, et al. , Current biology : CB, 2015 Mar 2, Volume 25, Issue 5, p.613-20, (2015) Abstract
Comparative validation of the D. melanogaster modENCODE transcriptome annotation., Chen, Zhen-Xia, Sturgill David, Qu Jiaxin, Jiang Huaiyang, Park Soo, Boley Nathan, Suzuki Ana Maria, Fletcher Anthony R., Plachetzki David C., FitzGerald Peter C., et al. , Genome research, 2014 Jul, Volume 24, Issue 7, p.1209-23, (2014) Abstract
The First Myriapod Genome Sequence Reveals Conservative Arthropod Gene Content and Genome Organisation in the Centipede Strigamia maritima., Chipman, Ariel D., Ferrier David E. K., Brena Carlo, Qu Jiaxin, Hughes Daniel S. T., Schröder Reinhard, Torres-Oliva Montserrat, Znassi Nadia, Jiang Huaiyang, Almeida Francisca C., et al. , PLoS biology, 2014 Nov, Volume 12, Issue 11, p.e1002005, (2014) Abstract
Evidence for Stabilizing Selection on Codon Usage in Chromosomal Rearrangements of Drosophila pseudoobscura., Fuller, Zachary L., Haynes Gwilym D., Zhu Dianhui, Batterton Matthew, Chao Hsu, Dugan Shannon, Javaid Mehwish, Jayaseelan Joy C., Lee Sandra, Li Mingmei, et al. , G3 (Bethesda, Md.), 2014 Oct 17, (2014) Abstract
The Cancer Genome Atlas Pan-Cancer analysis project., Chang, Kyle, Creighton Chad J., Davis Caleb F., Donehower Lawrence, Drummond Jennifer, Wheeler David, Ally Adrian, Balasundaram Miruna, Birol Inanc, Butterfield Yaron S. N., et al. , Nature genetics, 2013 Sep 26, Volume 45, Issue 10, p.1113-20, (2013)
Mind the gap: upgrading genomes with Pacific Biosciences RS long-read sequencing technology., English, Adam C., Richards Stephen, Han Yi, Wang Min, Vee Vanesa, Qu Jiaxin, Qin Xiang, Muzny Donna M., Reid Jeffrey G., Worley Kim C., et al. , PloS one, 2012, Volume 7, Issue 11, p.e47768, (2012) Abstract
The Drosophila melanogaster Genetic Reference Panel., Mackay, Trudy F. C., Richards Stephen, Stone Eric A., Barbadilla Antonio, Ayroles Julien F., Zhu Dianhui, Casillas Sònia, Han Yi, Magwire Michael M., Cridland Julie M., et al. , Nature, 2012 Feb 9, Volume 482, Issue 7384, p.173-8, (2012) Abstract
Patterns and rates of exonic de novo mutations in autism spectrum disorders., Neale, Benjamin M., Kou Yan, Liu Li, Ma'ayan Avi, Samocha Kaitlin E., Sabo Aniko, Lin Chiao-Feng, Stevens Christine, Wang Li-San, Makarov Vladimir, et al. , Nature, 2012 May 10, Volume 485, Issue 7397, p.242-5, (2012) Abstract
Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes., Biankin, Andrew V., Waddell Nicola, Kassahn Karin S., Gingras Marie-Claude, Muthuswamy Lakshmi B., Johns Amber L., Miller David K., Wilson Peter J., Patch Ann-Marie, Wu Jianmin, et al. , Nature, 2012 Nov 15, Volume 491, Issue 7424, p.399-405, (2012) Abstract
Epistasis dominates the genetic architecture of Drosophila quantitative traits., Huang, Wen, Richards Stephen, Carbone Mary Anna, Zhu Dianhui, Anholt Robert R. H., Ayroles Julien F., Duncan Laura, Jordan Katherine W., Lawrence Faye, Magwire Michael M., et al. , Proceedings of the National Academy of Sciences of the United States of America, 2012 Sep 25, Volume 109, Issue 39, p.15553-9, (2012) Abstract
The Drosophila melanogaster transcriptome by paired-end RNA sequencing., Daines, Bryce, Wang Hui, Wang Liguo, Li Yumei, Han Yi, Emmert David, Gelbart William, Wang Xia, Li Wei, Gibbs Richard, et al. , Genome research, 2011 Feb, Volume 21, Issue 2, p.315-24, (2011) Abstract
Functional and evolutionary insights from the genomes of three parasitoid Nasonia species., Werren, John H., Richards Stephen, Desjardins Christopher A., Niehuis Oliver, Gadau Jürgen, Colbourne John K., Werren John H., Richards Stephen, Desjardins Christopher A., Niehuis Oliver, et al. , Science (New York, N.Y.), 2010 Jan 15, Volume 327, Issue 5963, p.343-8, (2010) Abstract
High-throughput multiplex sequencing to discover copy number variants in Drosophila., Daines, Bryce, Wang Hui, Li Yumei, Han Yi, Gibbs Richard, and Chen Rui , Genetics, 2009 Aug, Volume 182, Issue 4, p.935-41, (2009) Abstract
High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies., Srivatsan, Anjana, Han Yi, Peng Jianlan, Tehranchi Ashley K., Gibbs Richard, Wang Jue D., and Chen Rui , PLoS genetics, 2008, Volume 4, Issue 8, p.e1000139, (2008) Abstract


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