Yi Han, Ph.D.

Assistant Professor, Department of Molecular and Human Genetics

image: Yi Han, Ph.D.Contact Information

yhan@bcm.edu

Publications

2024
Mahmoud M, Harting J, Corbitt H, Chen X, Jhangiani SN, Doddapaneni H, et al.. Closing the gap: Solving complex medically relevant genes at scale. medRxiv. 2024;.

Lim H, Gingras M-C, Zhao J, Byun J, Castro PD, Tsavachidis S, et al.. Somatic mutations of esophageal adenocarcinoma: a comparison between Black and White patients. Sci Rep. 2024;14(1):8988.

2022
Harris RA, Raveendran M, Lyfoung DT, Sedlazeck FJ, Mahmoud M, Prall TM, et al.. Construction of a new chromosome-scale, long-read reference genome assembly for the Syrian hamster, Mesocricetus auratus. Gigascience. 2022;11.

Menon V, Okhuysen PC, Chappell CL, Mahmoud M, Mahmoud M, Meng Q, et al.. Fully resolved assembly of Cryptosporidium parvum. Gigascience. 2022;11.

2020
Rotenberg D, Baumann AA, Ben-Mahmoud S, Christiaens O, Dermauw W, Ioannidis P, et al.. Genome-enabled insights into the biology of thrips as crop pests. BMC Biol. 2020;18(1):142.

Rotenberg D, Baumann AA, Ben-Mahmoud S, Christiaens O, Dermauw W, Ioannidis P, et al.. Correction to: Genome-enabled insights into the biology of thrips as crop pests. BMC Biol. 2020;18(1):169.

Sparks ME, Bansal R, Benoit JB, Blackburn MB, Chao H, Chen M, et al.. Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest. BMC Genomics. 2020;21(1):227.

Oeyen JPhilip, Baa-Puyoulet P, Benoit JB, Beukeboom LW, Bornberg-Bauer E, Buttstedt A, et al.. Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera. Genome Biol Evol. 2020;12(7):1099-1188.

Thomas GWC, Dohmen E, Hughes DST, Murali SC, Poelchau M, Glastad K, et al.. Gene content evolution in the arthropods. Genome Biol. 2020;21(1):15.

2019
Beck CR, Carvalho CMB, Akdemir ZC, Sedlazeck FJ, Song X, Meng Q, et al.. Megabase Length Hypermutation Accompanies Human Structural Variation at 17p11.2. Cell. 2019;176(6):1310-1324.e10.

Panfilio KA, Jentzsch IMVargas, Benoit JB, Erezyilmaz D, Suzuki Y, Colella S, et al.. Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome. Genome Biol. 2019;20(1):64.

2018
Armisén D, Rajakumar R, Friedrich M, Benoit JB, Robertson HM, Panfilio KA, et al.. The genome of the water strider Gerris buenoi reveals expansions of gene repertoires associated with adaptations to life on the water. BMC Genomics. 2018;19(1):832.

Lindsey ARI, Kelkar YD, Wu X, Sun D, Martinson EO, Yan Z, et al.. Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum. BMC Biol. 2018;16(1):54.

Poynton HC, Hasenbein S, Benoit JB, Sepulveda MS, Poelchau MF, Hughes DST, et al.. The Toxicogenome of Hyalella azteca: A Model for Sediment Ecotoxicology and Evolutionary Toxicology. Environ Sci Technol. 2018;52(10):6009-6022.

Harrison MC, Jongepier E, Robertson HM, Arning N, Bitard-Feildel T, Chao H, et al.. Hemimetabolous genomes reveal molecular basis of termite eusociality. Nat Ecol Evol. 2018;2(3):557-566.

Palesch D, Bosinger SE, Tharp GK, Vanderford TH, Paiardini M, Chahroudi A, et al.. Sooty mangabey genome sequence provides insight into AIDS resistance in a natural SIV host. Nature. 2018;553(7686):77-81.

2017
Hampton OA, English AC, Wang M, Salerno WJ, Liu Y, Muzny DM, et al.. SVachra: a tool to identify genomic structural variation in mate pair sequencing data containing inward and outward facing reads. BMC Genomics. 2017;18(Suppl 6):691.

Schwager EE, Sharma PP, Clarke T, Leite DJ, Wierschin T, Pechmann M, et al.. The house spider genome reveals an ancient whole-genome duplication during arachnid evolution. BMC Biol. 2017;15(1):62.

Papanicolaou A, Schetelig MF, Arensburger P, Atkinson PW, Benoit JB, Bourtzis K, et al.. Erratum to: The whole genome sequence of the Mediterranean fruit fly, Ceratitis capitata (Wiedemann), reveals insights into the biology and adaptive evolution of a highly invasive pest species. Genome Biol. 2017;18(1):11.

Eyun S-I, Soh HYoung, Posavi M, Munro JB, Hughes DST, Murali SC, et al.. Evolutionary History of Chemosensory-Related Gene Families across the Arthropoda. Mol Biol Evol. 2017;34(8):1838-1862.