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Intracranial germ cell tumors
Pancreaticobiliary and duodenal tumors
Polycythemia vera
Human Genomics
Charcot-Marie-Tooth Project
CHARGE Consortium
eMERGE
Genomic Variation
Genomics and Space Medicine (Space Omics)
GREGoR
Human Genome Project
Ion Channel Project
SNP Discovery
Somatic Mosaicism Across Human Tissues (SMaHT)
Trans-Omics for Precision Medicine (TopMed)
Microbial Genomics
Microbial Projects
A. apis
A. castellani Neff
B. pumilus F036B
B. pumilus SAFR-032
D. crinitum OH494
D. discoideum AX4
E. coli DH10B
E. faecalis OG1
F. nucleatum ATCC10953
F. nucleatum ATCC23726
F. tularensis MI001730
F. tularensis OR96246
F. tularensis OSU18
F. tularensis RC503
Moraxella bovis Epp63
M. haemolytica PHL213
Paenibacillus larvae
P. stewartii
P. violaceum P6
R. typhi
S. aureus MRSA USA300
S. aureus MSSA
S. iniae
Texas Medical Center Genomic Center for Infectious Diseases (TMC GCID)
Microbiome Data Release Policy
Comparative
Non-human primates
Baboon
Black and white colobus
Chimpanzee
Drill
Gibbon
Marmoset
Mouse lemur
Orangutan
Owl monkey
Rhesus monkey
Sifaka lemur
Sooty mangabey
Other Mammals
Armadillo
Bovine
Hyrax
Kangaroo Rat
Megabat
Mouse
Peromyscus
Rat
Sheep
Wallaby
Y Chromosome
Marine Mammals
Dolphin
Killer whale
Reptiles
Adder
Arthropods
i5K Pilot
Asian long-horned beetle
Bark scorpion
Bed bug
Brown marmorated stink bug
Brown recluse spider
Bull-headed dung beetle
Caddisfly
Colorado potato beetle
Common house spider
Emerald ash borer
Eurytemora affinis
German cockroach
Glassy-Winged Sharpshooter
Hackberry petiole gall psyllid
Hrabe's jumping bristletail
Hyalella azteca
Mayfly
Mediterranean fruit fly
Milkweed bug
Parasitic wasp: T. pretiosum
Parasitic wasp: C. floridanum
Parasitic wood wasp: O. abietinus
Scarce Chaser
Sheep blowfly
Silvestri's Northern Forcepstail
Turnip sawfly
Velvet worm
Water strider
Western black widow spider
Western flower thrips
Aphid
Bees
Bumble Bee
Dwarf Honey Bee
Honey Bee
Drosophila
D. melanogaster
D. pseudoobscura
Library Construction
DGRP
DGRP Lines
modEncode
Black Fly
Butterfly
Centipede
Hessian Fly
Mite
Parasitic Wasp
Red flour beetle
Sand Fly
Tobacco Hornworm
Other Invertebrates
Acorn Worm
Cuttlefish
Sea Urchin
Publications
Software
Atlas2
ATLAS GapFill
Atlas-Link
Atlas Whole Genome Assembly Suite
Bang
bcm-ace-plots
Cassandra
CBT++
CoCa
DRAGEN
ERIS
ExCID Report
Honey
Jelly
MegaDot
Mercury
Parliament2
Princess
SimPed
Sniffles2
SNP Tools
SVCollector
SVhound
xAtlas
Resources
FTP Site
FTP Site Help
Conditions of use
HGSC Intranet
Glossary
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Popular Content
Copy number analysis of the low-copy repeats at the primate NPHP1 locus by array comparative genomic hybridization.
Parliament2
Arthropod Genome Sequencing and Assembly Strategies.
WGSA: an annotation pipeline for human genome sequencing studies.
Temporal development of the gut microbiome in early childhood from the TEDDY study.
Mutually exclusive recurrent somatic mutations in MAP2K1 and BRAF support a central role for ERK activation in LCH pathogenesis.
Genomic signatures of cooperation and conflict in the social amoeba.
Mutations in the mitochondrial ribosomal protein MRPS22 lead to primary ovarian insufficiency.
Reproductive Longevity Predicts Mutation Rates in Primates.
Untangling the influences of unmodeled evolutionary processes on phylogenetic signal in a forensically important HIV-1 transmission cluster.
Improved full-length killer cell immunoglobulin-like receptor transcript discovery in Mauritian cynomolgus macaques.
Postdoctoral Associate - Genomics
Possible race and gender divergence in association of genetic variations with plasma von Willebrand factor: a study of ARIC and 1000 genome cohorts.
Christine Eng, M.D.
Human adipose tissue as a reservoir for memory CD4+ T cells and HIV.
The human transcript database: a catalogue of full length cDNA inserts.
Comparative Genomic Analyses of the Human NPHP1 Locus Reveal Complex Genomic Architecture and Its Regional Evolution in Primates.
Caleb Davis, Ph.D.
Recurrent CNVs and SNVs at the NPHP1 locus contribute pathogenic alleles to Bardet-Biedl syndrome.
LANA binds to multiple active viral and cellular promoters and associates with the H3K4methyltransferase hSET1 complex.
Protein-coding variants implicate novel genes related to lipid homeostasis contributing to body-fat distribution.
A proteomic landscape of diffuse-type gastric cancer.
Gene therapy rescues cilia defects and restores olfactory function in a mammalian ciliopathy model.
Perspective on Oncogenic Processes at the End of the Beginning of Cancer Genomics.
Complete genome sequence of Enterococcus faecium strain TX16 and comparative genomic analysis of Enterococcus faecium genomes.
Comparison of vitamin D metabolites in wild and captive baboons.
Phylogeny of the macaques (Cercopithecidae: Macaca) based on Alu elements.
Whole-exome sequencing identifies compound heterozygous mutations in WDR62 in siblings with recurrent polymicrogyria.
Color-blind fluorescence detection for four-color DNA sequencing.
The genome sequence of Drosophila melanogaster.
BCM-HGSC Aspera Server User Instructions
130 kb of DNA sequence reveals two new genes and a regional duplication distal to the human iduronate-2-sulfate sulfatase locus.
Sequencing technologies - the next generation.
De Novo GMNN Mutations Cause Autosomal-Dominant Primordial Dwarfism Associated with Meier-Gorlin Syndrome.
Novel CYP2A6 diplotypes identified through next-generation sequencing are associated with in-vitro and in-vivo nicotine metabolism.
Initial sequencing and analysis of the human genome.
Characterizing polymorphisms and allelic diversity of von Willebrand factor gene in the 1000 Genomes.
Identification of Rare Variants in Metabolites of the Carnitine Pathway by Whole Genome Sequencing Analysis.
Evolution of DNA Methylation in Papio Baboons.
A primer on a hepatocellular carcinoma bioresource bank using the cancer genome atlas guidelines: practical issues and pitfalls.
Germline mutations in shelterin complex genes are associated with familial glioma.
Reorganization and expansion of the nidoviral family Arteriviridae.
Mutational landscape of aggressive cutaneous squamous cell carcinoma.
MLH1-rheMac hereditary nonpolyposis colorectal cancer syndrome in rhesus macaques.
Recurrent DGCR8, DROSHA, and SIX homeodomain mutations in favorable histology Wilms tumors.
The ethics of conducting molecular autopsies in cases of sudden death in the young.
Comprehensive Pan-Genomic Characterization of Adrenocortical Carcinoma.
Integrative genomic analysis reveals novel regulatory mechanisms of eyeless during Drosophila eye development.
Hutterite-type cataract maps to chromosome 6p21.32-p21.31, cosegregates with a homozygous mutation in LEMD2, and is associated with sudden cardiac death.
The Human Genome Project 20th Anniversary Symposium
A second generation human haplotype map of over 3.1 million SNPs.
Gene Therapy Rescues Retinal Degeneration in Receptor Expression-Enhancing Protein 6 Mutant Mice.
Extremely low-coverage whole genome sequencing in South Asians captures population genomics information.
The genomic basis of circadian and circalunar timing adaptations in a midge.
Loss of Rho GDIα and resistance to tamoxifen via effects on estrogen receptor α.
PrimerSNP: a web tool for whole-genome selection of allele-specific and common primers of phylogenetically-related bacterial genomic sequences.
Best Practices in Insect Genome Sequencing: What Works and What Doesn't.
Association of the T-cell regulatory gene CTLA4 with susceptibility to autoimmune disease.
Human Genome Sequencing Center awarded a grant from National Institute of Standards and Technology (NIST)
Atlas-CNV: a validated approach to call single-exon CNVs in the eMERGESeq gene panel.
Association between somatostatin receptor 5 gene polymorphisms and pancreatic cancer risk and survival.
Characterization of chromosomal abnormalities in pregnancy losses reveals critical genes and loci for human early development.
A Comprehensive Pan-Cancer Molecular Study of Gynecologic and Breast Cancers.
Jie Li, M.D. Ph.D.
Spata7 is a retinal ciliopathy gene critical for correct RPGRIP1 localization and protein trafficking in the retina.
Monoallelic and Biallelic Variants in EMC1 Identified in Individuals with Global Developmental Delay, Hypotonia, Scoliosis, and Cerebellar Atrophy.
An exome array study of the plasma metabolome.
Identification of genes and pathways involved in kidney renal clear cell carcinoma.
Genetic fine mapping and genomic annotation defines causal mechanisms at type 2 diabetes susceptibility loci.
Bos taurus genome assembly.
Genomic and proteomic analysis of transcription factor TFII-I reveals insight into the response to cellular stress.
Tools for annotation and comparison of structural variation.
Genomic sequencing for cancer diagnosis and therapy.
Whole-Exome Sequencing in Familial Parkinson Disease.
Whole-exome sequencing points to considerable genetic heterogeneity of cerebral palsy.
Full disclosure: Genome assembly is still hard.
Altered neuronal network and rescue in a human MECP2 duplication model.
28-way vertebrate alignment and conservation track in the UCSC Genome Browser.
A biallelic ANTXR1 variant expands the anthrax toxin receptor associated phenotype to tooth agenesis.
Metagenomic pyrosequencing and microbial identification.
Molecular and Clinical Findings in Patients With Knobloch Syndrome.
Pathogenetics of alveolar capillary dysplasia with misalignment of pulmonary veins.
Designing new microsatellite markers for linkage and population genetic analyses in rhesus macaques and other nonhuman primates.
Mutations in smooth muscle alpha-actin (ACTA2) cause coronary artery disease, stroke, and Moyamoya disease, along with thoracic aortic disease.
Haplotype structure, LD blocks, and uneven recombination within the LRP5 gene.
Emerging technologies in DNA sequencing.
Enrichment of mutations in chromatin regulators in people with Rett syndrome lacking mutations in MECP2.
Eve Shinbrot, Ph.D.
Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia.
Hypomorphic mutations identified in the candidate Leber congenital amaurosis gene CLUAP1.
Initial sequencing and comparative analysis of the mouse genome.
A high-resolution map of human evolutionary constraint using 29 mammals.
Recurrent Muscle Weakness with Rhabdomyolysis, Metabolic Crises, and Cardiac Arrhythmia Due to Bi-allelic TANGO2 Mutations.
A simple and evolutional approach proven to recanalise the nasolacrimal duct obstruction.
ATF6 Is Mutated in Early Onset Photoreceptor Degeneration With Macular Involvement.
Integrated analyses of microRNAs demonstrate their widespread influence on gene expression in high-grade serous ovarian carcinoma.
Absence of heterozygosity due to template switching during replicative rearrangements.
Non-malignant respiratory epithelial cells preferentially proliferate from resected non-small cell lung cancer specimens cultured under conditionally reprogrammed conditions.
PBHoney: identifying genomic variants via long-read discordance and interrupted mapping.
Further evidence for phenotypic signatures of hybridization in descendant baboon populations.
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Home
About Us
People
Funding
News
Contact Us
Visiting HGSC
Careers
Postdoctoral Associate- Genomics
Projects
Clinical Lab
eMERGE
HeartCare
KidsCanSeq Study
RIGHT10K Study
TMC-CZI Project
Cancer Genomics
The Cancer Genome Atlas Project (TCGA)
Intracranial germ cell tumors
Pancreaticobiliary and duodenal tumors
Polycythemia vera
Human Genomics
Charcot-Marie-Tooth Project
CHARGE Consortium
eMERGE
Genomic Variation
Genomics and Space Medicine (Space Omics)
GREGoR
Human Genome Project
Ion Channel Project
SNP Discovery
Somatic Mosaicism Across Human Tissues (SMaHT)
Trans-Omics for Precision Medicine (TopMed)
Microbial Genomics
Microbial Projects
A. apis
A. castellani Neff
B. pumilus F036B
B. pumilus SAFR-032
D. crinitum OH494
D. discoideum AX4
E. coli DH10B
E. faecalis OG1
F. nucleatum ATCC10953
F. nucleatum ATCC23726
F. tularensis MI001730
F. tularensis OR96246
F. tularensis OSU18
F. tularensis RC503
Moraxella bovis Epp63
M. haemolytica PHL213
Paenibacillus larvae
P. stewartii
P. violaceum P6
R. typhi
S. aureus MRSA USA300
S. aureus MSSA
S. iniae
Texas Medical Center Genomic Center for Infectious Diseases (TMC GCID)
Microbiome Data Release Policy
Comparative
Non-human primates
Baboon
Black and white colobus
Chimpanzee
Drill
Gibbon
Marmoset
Mouse lemur
Orangutan
Owl monkey
Rhesus monkey
Sifaka lemur
Sooty mangabey
Other Mammals
Armadillo
Bovine
Hyrax
Kangaroo Rat
Megabat
Mouse
Peromyscus
Rat
Sheep
Wallaby
Y Chromosome
Marine Mammals
Dolphin
Killer whale
Reptiles
Adder
Arthropods
i5K Pilot
Asian long-horned beetle
Bark scorpion
Bed bug
Brown marmorated stink bug
Brown recluse spider
Bull-headed dung beetle
Caddisfly
Colorado potato beetle
Common house spider
Emerald ash borer
Eurytemora affinis
German cockroach
Glassy-Winged Sharpshooter
Hackberry petiole gall psyllid
Hrabe's jumping bristletail
Hyalella azteca
Mayfly
Mediterranean fruit fly
Milkweed bug
Parasitic wasp: T. pretiosum
Parasitic wasp: C. floridanum
Parasitic wood wasp: O. abietinus
Scarce Chaser
Sheep blowfly
Silvestri's Northern Forcepstail
Turnip sawfly
Velvet worm
Water strider
Western black widow spider
Western flower thrips
Aphid
Bees
Bumble Bee
Dwarf Honey Bee
Honey Bee
Drosophila
D. melanogaster
D. pseudoobscura
Library Construction
DGRP
DGRP Lines
modEncode
Black Fly
Butterfly
Centipede
Hessian Fly
Mite
Parasitic Wasp
Red flour beetle
Sand Fly
Tobacco Hornworm
Other Invertebrates
Acorn Worm
Cuttlefish
Sea Urchin
Publications
Software
Atlas2
ATLAS GapFill
Atlas-Link
Atlas Whole Genome Assembly Suite
Bang
bcm-ace-plots
Cassandra
CBT++
CoCa
DRAGEN
ERIS
ExCID Report
Honey
Jelly
MegaDot
Mercury
Parliament2
Princess
SimPed
Sniffles2
SNP Tools
SVCollector
SVhound
xAtlas
Resources
FTP Site
FTP Site Help
Conditions of use
HGSC Intranet
Glossary